DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and Glis2

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_038941774.1 Gene:Glis2 / 302946 RGDID:1309177 Length:522 Species:Rattus norvegicus


Alignment Length:122 Identity:44/122 - (36%)
Similarity:65/122 - (53%) Gaps:5/122 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 DEEPKFRCTHRGCNKEFRNHSAMRK----HMHTH-GPRGHVCNVCGKSFVESSKLKRHQLVHTGE 556
            :::.::.|...||.:..|..:|.|.    |:.|| ..:.|.|..|.|||.....||.|...||||
  Rat   197 EQDARYCCHWEGCARHGRGFNASRYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTGE 261

  Fly   557 KPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHMLTH 613
            ||:.|.:|||.||:|...:...|.|.|..|:||:|.:.||.|.:...::|:.|:..|
  Rat   262 KPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 44/115 (38%)
C2H2 Zn finger 504..526 CDD:275368 7/25 (28%)
C2H2 Zn finger 533..553 CDD:275368 8/19 (42%)
C2H2 Zn finger 561..583 CDD:275368 9/21 (43%)
C2H2 Zn finger 591..613 CDD:275368 6/21 (29%)
Glis2XP_038941774.1 C2H2 Zn finger 213..230 CDD:275368 4/16 (25%)
COG5048 234..>328 CDD:227381 35/85 (41%)
C2H2 Zn finger 238..258 CDD:275368 8/19 (42%)
C2H2 Zn finger 266..288 CDD:275368 9/21 (43%)
C2H2 Zn finger 296..318 CDD:275368 6/21 (29%)

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