DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and gli2

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002943329.3 Gene:gli2 / 100498653 XenbaseID:XB-GENE-481810 Length:1474 Species:Xenopus tropicalis


Alignment Length:435 Identity:103/435 - (23%)
Similarity:161/435 - (37%) Gaps:122/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 SEDEDEEEELEE-------PPGCAGTTSVTSSSAAQNEGSPSMPKLI------------IDEHMI 306
            |..|...|.|:|       |||.|.|......:...:..||....|:            :.|::.
 Frog   138 SPAEVAHEHLKERGIFGLAPPGTAPTEYCHQMAILASHASPYGELLVQSAAAAAGNTAHLHEYLT 202

  Fly   307 NHDV-------LSDGIGNEYVILPDPFSASAVTDVEEVV----NAFMGDVKGEEDSQPLS----- 355
            ..||       ::..:..:..:...|.|.::: |::.::    |:.:..:.....|...|     
 Frog   203 PMDVSRFSSPRVTPRLSRKRALSISPLSDASI-DLQTMIRTSPNSLVAYINNSRSSSAASGSYGH 266

  Fly   356 ---------------------EQLIYAENQLEEAYGNIELIENMPNNVELIQTPGPGPATVSVAL 399
                                 :||:..:..|..::|:..|:...|......|.          ||
 Frog   267 LSAGAISPAFSFPHPINPVAYQQLLSQQRSLTSSFGHAPLLHPSPTFAPRQQG----------AL 321

  Fly   400 SKVNGCVPNPQPALPKLVLQNSSTNVRLKSAGNQ-----SKVTKRQLTAAAQVATPNPPPPLVAS 459
            :..|...|:...:.|..||...|:...:.|..||     |||  :......|..:|:||..|   
 Frog   322 TSANPAPPSNNSSTPDSVLNKGSSESAVSSTVNQVIPKRSKV--KMEDEGLQRDSPSPPDHL--- 381

  Fly   460 SNPARPQRPTIVTKLPTAVANQTAGNAMGAAGAAGEEDE---EP----KFRCTHRGCNKEFRNHS 517
                        |.|...:                ::||   ||    :..|...||:.||....
 Frog   382 ------------TDLKEDL----------------DKDECKQEPDVIYETNCHWDGCSHEFDTQD 418

  Fly   518 AMRKHM---HTHGP------RGHVCNVCGKSFVESSKLKRHQLVHTGEKPFECTFEGCGKRFSLD 573
            .:..|:   |.||.      |.|.|:...|.|.....|..|...||||||.:||||||.|.:|..
 Frog   419 QLVHHINNDHIHGEKKEFVCRWHDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCYKAYSRL 483

  Fly   574 FNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHM-LTHTKPK 617
            .||:||:|.|||::||.|..:||:|.|:.:::...|. .||:..|
 Frog   484 ENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 47/119 (39%)
C2H2 Zn finger 504..526 CDD:275368 7/24 (29%)
C2H2 Zn finger 533..553 CDD:275368 5/19 (26%)
C2H2 Zn finger 561..583 CDD:275368 13/21 (62%)
C2H2 Zn finger 591..613 CDD:275368 6/22 (27%)
gli2XP_002943329.3 C2H2 Zn finger 441..463 CDD:275368 6/21 (29%)
SFP1 <465..555 CDD:227516 31/64 (48%)
C2H2 Zn finger 471..493 CDD:275368 13/21 (62%)
C2H2 Zn finger 501..524 CDD:275368 6/22 (27%)
C2H2 Zn finger 532..553 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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