DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and gli1

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002939471.1 Gene:gli1 / 100494064 XenbaseID:XB-GENE-482644 Length:1371 Species:Xenopus tropicalis


Alignment Length:407 Identity:101/407 - (24%)
Similarity:148/407 - (36%) Gaps:124/407 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 EELEEPPGCAGTTSVTSS---SAAQNEGSPSMPKLIIDEHMINHDV------------------- 310
            |.:.|.|.|..|..:||.   ..||           ..:|:...||                   
 Frog    36 EGMNEMPYCHQTNLMTSHHGFGLAQ-----------ASDHLAGTDVSRFSTPRNTMKLSKKRAMS 89

  Fly   311 ---LSD-GIGNEYVILPDPFSASAVTDVEEVVNAFMGDVKGEEDSQPLSEQLIYAENQLEE---- 367
               ||| .|..:.:|...|  .|.|..:....::..|.. |......:|..|.| :|.|..    
 Frog    90 ISPLSDASIDLQTMIRTSP--NSLVAFINSRCSSASGSY-GHLSIGTISPSLGY-QNCLNHQRPQ 150

  Fly   368 --AYGNIELIENMP-NNVELIQTPGPGPATVSVALSKVNGCVPNPQPALPKLVLQNSSTNVRLKS 429
              :|||..|   || |:.:.:.:.|.|   :....|.:..|....:|               |.|
 Frog   151 GGSYGNNPL---MPYNSHDHMSSRGVG---MLQPRSSIKHCQLKSEP---------------LSS 194

  Fly   430 AGNQSKVTKR-------QLTAAAQVATPNPPPPLVASSNPARPQRPTIVTKLPTAVANQTAGNAM 487
            .|.....:||       .:::.|.|.|.:|...|:...:..                        
 Frog   195 TGLDPIGSKRLEDGSEGDISSPASVGTQDPLLGLLDGRDDL------------------------ 235

  Fly   488 GAAGAAGEEDE---EP----KFRCTHRGCNKEFRNHSAMRKHM---HTHGPRGH-VCN--VCGKS 539
                   |:|:   ||    :..|....|.|||.....:..|:   |.||.:.. ||:  .|.:.
 Frog   236 -------EKDDGKHEPETVYETNCHWESCTKEFDTQEHLVHHINNEHIHGEKKEFVCHWQDCSRE 293

  Fly   540 ---FVESSKLKRHQLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFA 601
               |.....|..|...||||||.:||||||.|.:|...||:||:|.|||::||.|..:||:|.|:
 Frog   294 LRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFS 358

  Fly   602 QSTNLKSHM-LTHTKPK 617
            .:::...|. .||:..|
 Frog   359 NASDRAKHQNRTHSNEK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 46/119 (39%)
C2H2 Zn finger 504..526 CDD:275368 7/24 (29%)
C2H2 Zn finger 533..553 CDD:275368 5/24 (21%)
C2H2 Zn finger 561..583 CDD:275368 13/21 (62%)
C2H2 Zn finger 591..613 CDD:275368 6/22 (27%)
gli1XP_002939471.1 SFP1 <312..402 CDD:227516 31/64 (48%)
C2H2 Zn finger 318..340 CDD:275368 13/21 (62%)
C2H2 Zn finger 348..371 CDD:275368 6/22 (27%)
C2H2 Zn finger 379..400 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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