DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and zic5

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002937128.1 Gene:zic5 / 100492793 XenbaseID:XB-GENE-480775 Length:520 Species:Xenopus tropicalis


Alignment Length:133 Identity:54/133 - (40%)
Similarity:69/133 - (51%) Gaps:15/133 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   495 EEDEEPKFRCTHRGCNKEFRNHSAMRKHM---HTHGPR--GHVC--NVC---GKSFVESSKLKRH 549
            ::|:..|     :.|:|.|.....:..|:   |..||.  .|||  ..|   ||.|....||..|
 Frog   278 DQDQSSK-----KPCSKTFSTMHELVNHVTVEHVGGPEQSTHVCFWEECSREGKPFKAKYKLVNH 337

  Fly   550 QLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHMLTHT 614
            ..||||||||.|.|.||||.|:...||:.|.|.|||::|:.|..|||.:.||.|::.|.|...||
 Frog   338 IRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSHVHT 402

  Fly   615 KPK 617
            ..|
 Frog   403 SDK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 49/119 (41%)
C2H2 Zn finger 504..526 CDD:275368 5/24 (21%)
C2H2 Zn finger 533..553 CDD:275368 8/24 (33%)
C2H2 Zn finger 561..583 CDD:275368 11/21 (52%)
C2H2 Zn finger 591..613 CDD:275368 9/21 (43%)
zic5XP_002937128.1 zf_ZIC 266..309 CDD:436441 7/35 (20%)
COG5048 <281..431 CDD:227381 53/130 (41%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
C2H2 Zn finger 349..371 CDD:275368 11/21 (52%)
C2H2 Zn finger 379..401 CDD:275368 9/21 (43%)
C2H2 Zn finger 409..431 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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