DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and AT5G16880

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001331679.1 Gene:AT5G16880 / 831551 AraportID:AT5G16880 Length:407 Species:Arabidopsis thaliana


Alignment Length:433 Identity:121/433 - (27%)
Similarity:188/433 - (43%) Gaps:100/433 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTLTVL 81
            |..:.:|.||..||...:|..|:|||||||:.:..:.:.:|.|:||:..   |..::....|.:|
plant    47 PTDKIVEDATTENLEEPDWDMNLEICDMINQETINSVELIRGIKKRIMM---KQPRIQYLALVLL 108

  Fly    82 ETCVKNCGKAFHVLVAQKDFINELVKLIGPKNDPPAAM--QEKVLSLIQIWADAFKNQPDLNGVT 144
            |||||||.|||..:.|:: .::|:||||   :||...:  :.|.|.||:.|.::......|....
plant   109 ETCVKNCEKAFSEVAAER-VLDEMVKLI---DDPQTVVNNRNKALMLIEAWGESTSELRYLPVFE 169

  Fly   145 QMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVA-AQQHTISPQHMAAAAAAAAAAAAP 208
            :.|..||.:||.||..|.:::|||:||.||.|  .|:|.| ..||...|.|:.......:     
plant   170 ETYKSLKARGIRFPGRDNESLAPIFTPARSTP--APELNADLPQHVHEPAHIQYDVPVRS----- 227

  Fly   209 PSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNELTST----CKEMQ 269
                   .|.||.   :...:|..|::.:||.:||      .||...||.::||:|    |::.|
plant   228 -------FTAEQT---KEAFDIARNSIELLSTVLS------SSPQHDALQDDLTTTLVQQCRQSQ 276

  Fly   270 S---RIVDLIGRVQDDELTAEFLRINDELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGAAMGLP 331
            :   ||::..|  :::.|..|.|.:||||.....:::...|            |||.|.:     
plant   277 TTVQRIIETAG--ENEALLFEALNVNDELVKTLSKYEEMNK------------PSAPLTS----- 322

  Fly   332 GVGAAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISLGGGAPIGVQR 396
                            ..|....|:..|....     |...||:.:.:|.|   :.||...|...
plant   323 ----------------HEPAMIPVAEEPDDSP-----IHGREESLVRKSSG---VRGGFHGGGGS 363

  Fly   397 SARPADEFDML-------AQSRTDGNH----------KSDLLR 422
            .....|:.|.:       ..|.|:.:|          ..||:|
plant   364 GDDMMDDLDEMIFGKKNGCDSSTNPDHDPKKEQSSSKNDDLIR 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 51/142 (36%)
GAT_TOM1_like 222..307 CDD:260091 25/91 (27%)
AT5G16880NP_001331679.1 VHS 49..177 CDD:340765 47/134 (35%)
GAT_GGA-like_plant 237..313 CDD:410579 25/83 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1087
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1213216at2759
OrthoFinder 1 1.000 - - FOG0000599
OrthoInspector 1 1.000 - - otm2782
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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