DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and AT3G08790

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_187491.1 Gene:AT3G08790 / 820026 AraportID:AT3G08790 Length:607 Species:Arabidopsis thaliana


Alignment Length:495 Identity:118/495 - (23%)
Similarity:195/495 - (39%) Gaps:105/495 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTLTVLETCVK 86
            ::.||...|...:||.|:|||||:|......|:.:..|:|||:....|   |.:..||:|||.:.
plant     6 VDRATSDMLIGPDWAMNLEICDMLNHEPGQTREVVSGIKKRLTSRTSK---VQLLALTLLETIIT 67

  Fly    87 NCGKAFHVLVAQKDFINELVKLIGPKNDPPAAMQEKVLSLIQIWADAFK----NQPDLNGVTQMY 147
            |||:..|:.||:||.::::||:  .|..|...::||:|.||..|.::|.    ..|.....   |
plant    68 NCGELIHMQVAEKDILHKMVKM--AKRKPNIQVKEKILILIDTWQESFSGPQGRHPQYYAA---Y 127

  Fly   148 MELKNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAAAAAAAAAAAAPPSTG 212
            .||...||.|             |||  |::.|........|..||:...|...|...:......
plant   128 QELLRAGIVF-------------PQR--PQITPSSGQNGPSTRYPQNSRNARQEAIDTSTESEFP 177

  Fly   213 PLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNELTSTCKEMQSRIVDLIG 277
            .|.||         |::.....|.:|:||::.:....:......::.:|.|.|:..:.|:|.|:.
plant   178 TLSLT---------EIQNARGIMDVLAEMMNAIDGNNKEGLKQEVVVDLVSQCRTYKQRVVHLVN 233

  Fly   278 RVQDDELTAEFLRINDELNNVFLRHQ----------RYEKNRSQ---------GQGAGVTSPSAV 323
            ...|:.:..:.|.:||:|..:..:|:          :.||::.:         ..|:..|...:|
plant   234 STSDESMLCQGLALNDDLQRLLAKHEAIASGNSMIKKEEKSKKEVPKDTTQIIDVGSSETKNGSV 298

  Fly   324 LGAAMGLPGVGAAGA---------GATTVATLPPPPTTTAVSNTPQSDQLLIDLI-----ESSEE 374
            :......|.:.....         .:..:..|.||..::.|:. |.:..:|||::     |||..
plant   299 VAYTTNGPKIDLLSGDDFETPNADNSLALVPLGPPQPSSPVAK-PDNSIVLIDMLSDNNCESSTP 362

  Fly   375 AQLP-------------------QSLGQISLGGGAPIG----VQRSARPA-------DEFDMLAQ 409
            ...|                   |.......|..||:.    .|:.:.||       ..|...|.
plant   363 TSNPHANHQKVQQNYSNGFGPGHQEQSYYGQGSSAPVWNLQITQQPSSPAYGNQPFSPNFSPPAS 427

  Fly   410 SRTDGNHKSDLLRDIPSVDAAAGSVTATASP-YKPNQPQQ 448
            ....|.:.:.|....|..:|.:.|    :|| |.|..|.|
plant   428 PHYGGQNNNVLALPPPPWEAQSPS----SSPQYSPTHPMQ 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 49/139 (35%)
GAT_TOM1_like 222..307 CDD:260091 17/94 (18%)
AT3G08790NP_187491.1 VHS 2..132 CDD:239620 47/133 (35%)
GAT_GGA_like_plant 183..261 CDD:260089 17/77 (22%)
PAT1 <366..>541 CDD:330585 21/102 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2574
eggNOG 1 0.900 - - E1_KOG1087
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I1726
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000599
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102984
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.720

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