DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and Gga2

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_083034.1 Gene:Gga2 / 74105 MGIID:1921355 Length:603 Species:Mus musculus


Alignment Length:478 Identity:116/478 - (24%)
Similarity:209/478 - (43%) Gaps:70/478 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTLTVLETCVK 86
            :..|||.::|.::|:|..:.|:.:|........|...:..::.....|.   .:|.|||||.|:.
Mouse    33 LNKATDPSMAEQDWSAIQKFCEQVNTDPSGPTHAPWLLAHKIQSPQEKE---ALYALTVLEICMN 94

  Fly    87 NCGKAFHVLVAQKDFINELVKLIGPKNDPPAAMQE---KVLSLIQIWADAFKNQPDLNGVTQMYM 148
            :||:.||..||:..|:|||:|::.||.....|.::   :|:.::..|...|   |:...:...|.
Mouse    95 HCGEKFHSEVAKFRFLNELIKVLSPKYLGAWATEKVKGRVIEILFSWTVWF---PEDIKIRDAYQ 156

  Fly   149 ELKNKGI--EFPANDLDAMAPIYTP-QRSV---PEMPPQLVAAQQHTISPQHMAAAAAAAAAAAA 207
            .||.:||  :.|...:|.:.|..:| .:|:   .|...:|:.....:..|:.:.||.....    
Mouse   157 MLKKQGIIKQDPKLPMDKILPPPSPWPKSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIK---- 217

  Fly   208 PPSTGPLHLTPEQAAKLR------SELEIVSNNMSILSEMLSVL-KPGQESPDDYALLNELTSTC 265
                   :|..|:..|..      |.:|.|.:::.:|.||||:. :||...||..| |..:...|
Mouse   218 -------NLVKEEQEKSEKVSRRVSAVEEVRSHVRVLREMLSMYRRPGHALPDQQA-LQVVYERC 274

  Fly   266 KEMQSRIVDLIG-RVQDDELTAEFLRINDELNNVFLRHQRYEKNRSQGQ-GAGVTSPSAV--LGA 326
            ::::..:..|.. ...||:..||.|:.||.|.    :..|..|...:|: .||...|:||  :.|
Mouse   275 EKLRPTLFRLASDTTDDDDALAEILQANDLLT----QGVRLYKQVVEGRVSAGNAVPAAVGAIPA 335

  Fly   327 AMGLPGVGAAGAGA-----TTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISL 386
            ....|.....|...     .|.:.|........:::.|..:|::|.  ....:.:.|   |.|:|
Mouse   336 PRAFPNPEPCGLNCPLIDLETPSLLHQDLAALGINDVPTRNQVVIP--SCCNDKKQP---GAITL 395

  Fly   387 GGGAPIGVQRSARPADEFDMLAQSRTDG-NH--KSDLLRDIPSVDAA-------AGSV-TATASP 440
            .||   |:|..:...:..|:.:...:.| |:  :..:.:::|....|       ||.: ::|||.
Mouse   396 MGG---GIQSLSADRNLLDLFSPQPSPGLNYVPQKSIPKEVPPGTKASPGWSWEAGPLASSTASQ 457

  Fly   441 YKPNQ----PQQAQRSAGEPPVV 459
            ..|..    |.::.:.:..||:|
Mouse   458 NTPLAHVFVPLESVKPSSLPPIV 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 40/140 (29%)
GAT_TOM1_like 222..307 CDD:260091 26/92 (28%)
Gga2NP_083034.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
VHS_GGA2 29..166 CDD:340807 40/138 (29%)
GGA_N-GAT 187..226 CDD:375735 7/49 (14%)
GAT_SF 229..317 CDD:383514 26/92 (28%)
Unstructured hinge 318..473 34/162 (21%)
Alpha_adaptinC2 481..595 CDD:197886 116/478 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831181
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2130
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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