DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3529 and tom1

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001338580.1 Gene:tom1 / 553244 ZFINID:ZDB-GENE-060721-1 Length:454 Species:Danio rerio


Alignment Length:522 Identity:182/522 - (34%)
Similarity:279/522 - (53%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FFNVGALGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAG 68
            ||.    ||.|||||||.||.||.::|.||:|..||||||::||:.:..:||:|||:||:..|  
Zfish     3 FFT----GNPFSTPVGQLIEHATSSSLPSEDWGLNMEICDLVNEAQEGPKDAVRAIKKRILGN-- 61

  Fly    69 KNNQVVMYTLTVLETCVKNCGKAFHVLVAQKDFI-NELVKLIGPKNDPPAAMQEKVLSLIQIWAD 132
            :|.:.||..|:|||.||||||..|||.|:.:||: |.||:.|.|||:.|..:|::||.:||.|||
Zfish    62 RNFKEVMLALSVLEACVKNCGHKFHVYVSTRDFVENVLVQTILPKNNAPVVLQDRVLIMIQAWAD 126

  Fly   133 AFKNQPDLNGVTQMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAA 197
            ||::..||.||..:|.:|:.:|:|||..:|:..:||:||:|||..:.|.....:.|.::      
Zfish   127 AFRSSTDLTGVVTVYEDLRRRGVEFPMTELNGYSPIHTPKRSVENVSPVKAHTESHPVT------ 185

  Fly   198 AAAAAAAAAAPPST-GPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNEL 261
                   ::.|.:| .|:.|:|:|...:::|||:|.||:|::|:|::.::|....|.|..||.:|
Zfish   186 -------SSQPQNTETPVTLSPKQMKTIKAELEVVRNNLSVMSDMMNQMEPATFEPSDTELLQQL 243

  Fly   262 TSTCKEMQSRIVDLIGRVQDDELTAEFLRINDELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGA 326
            .|..|:||||:|::|..:.|::||.:.|..||::|..|.::.|:||:.|:...|...:||     
Zfish   244 YSMTKDMQSRMVEVIPTLTDEKLTEQLLNANDDINTTFTQYHRFEKHLSRQSSAQPNAPS----- 303

  Fly   327 AMGLPGVGAAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISLGGGAP 391
                          |.:..|..|....|.:...||....:                         
Zfish   304 --------------TNLTDLDSPKQLKAANGAHQSAVTTL------------------------- 329

  Fly   392 IGVQRSARPADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKPNQPQQAQ--RSAG 454
                     :::...|:....|.|.||..|...|...|      |.|:|.:.....:::  .|.|
Zfish   330 ---------SNQMSGLSTKEDDLNFKSSSLLKSPERSA------ALATPGRDTGLDESRDSTSLG 379

  Fly   455 EPP----VVSKS---TKENEI-DEMEAWLGSSHIEGIEE-LTSSEFDKFLEERAAAAENLPTISA 510
            ..|    ::.|.   ..::|: |::|.||.....|...| :||.||||||.|||.|||.||::.|
Zfish   380 SSPQFLWMIEKGMIPVNQSEVMDDIEQWLDDVDDEDDSEGVTSEEFDKFLAERAKAAERLPSVKA 444

  Fly   511 SN 512
            |:
Zfish   445 SH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 73/141 (52%)
GAT_TOM1_like 222..307 CDD:260091 32/84 (38%)
tom1NP_001338580.1 VHS_ENTH_ANTH 12..152 CDD:321980 73/141 (52%)
GAT_TOM1_like 203..289 CDD:260091 32/85 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574142
Domainoid 1 1.000 179 1.000 Domainoid score I3490
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1213216at2759
OrthoFinder 1 1.000 - - FOG0000599
OrthoInspector 1 1.000 - - otm25424
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13856
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.950

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