DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and tom1

DIOPT Version :10

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001338580.1 Gene:tom1 / 553244 ZFINID:ZDB-GENE-060721-1 Length:454 Species:Danio rerio


Alignment Length:522 Identity:182/522 - (34%)
Similarity:279/522 - (53%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FFNVGALGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAG 68
            ||.    ||.|||||||.||.||.::|.||:|..||||||::||:.:..:||:|||:||:..|  
Zfish     3 FFT----GNPFSTPVGQLIEHATSSSLPSEDWGLNMEICDLVNEAQEGPKDAVRAIKKRILGN-- 61

  Fly    69 KNNQVVMYTLTVLETCVKNCGKAFHVLVAQKDFI-NELVKLIGPKNDPPAAMQEKVLSLIQIWAD 132
            :|.:.||..|:|||.||||||..|||.|:.:||: |.||:.|.|||:.|..:|::||.:||.|||
Zfish    62 RNFKEVMLALSVLEACVKNCGHKFHVYVSTRDFVENVLVQTILPKNNAPVVLQDRVLIMIQAWAD 126

  Fly   133 AFKNQPDLNGVTQMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAA 197
            ||::..||.||..:|.:|:.:|:|||..:|:..:||:||:|||..:.|.....:.|.::      
Zfish   127 AFRSSTDLTGVVTVYEDLRRRGVEFPMTELNGYSPIHTPKRSVENVSPVKAHTESHPVT------ 185

  Fly   198 AAAAAAAAAAPPST-GPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNEL 261
                   ::.|.:| .|:.|:|:|...:::|||:|.||:|::|:|::.::|....|.|..||.:|
Zfish   186 -------SSQPQNTETPVTLSPKQMKTIKAELEVVRNNLSVMSDMMNQMEPATFEPSDTELLQQL 243

  Fly   262 TSTCKEMQSRIVDLIGRVQDDELTAEFLRINDELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGA 326
            .|..|:||||:|::|..:.|::||.:.|..||::|..|.::.|:||:.|:...|...:||     
Zfish   244 YSMTKDMQSRMVEVIPTLTDEKLTEQLLNANDDINTTFTQYHRFEKHLSRQSSAQPNAPS----- 303

  Fly   327 AMGLPGVGAAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISLGGGAP 391
                          |.:..|..|....|.:...||....:                         
Zfish   304 --------------TNLTDLDSPKQLKAANGAHQSAVTTL------------------------- 329

  Fly   392 IGVQRSARPADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKPNQPQQAQ--RSAG 454
                     :::...|:....|.|.||..|...|...|      |.|:|.:.....:::  .|.|
Zfish   330 ---------SNQMSGLSTKEDDLNFKSSSLLKSPERSA------ALATPGRDTGLDESRDSTSLG 379

  Fly   455 EPP----VVSKS---TKENEI-DEMEAWLGSSHIEGIEE-LTSSEFDKFLEERAAAAENLPTISA 510
            ..|    ::.|.   ..::|: |::|.||.....|...| :||.||||||.|||.|||.||::.|
Zfish   380 SSPQFLWMIEKGMIPVNQSEVMDDIEQWLDDVDDEDDSEGVTSEEFDKFLAERAKAAERLPSVKA 444

  Fly   511 SN 512
            |:
Zfish   445 SH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 71/137 (52%)
GAT_TOM1_like 222..307 CDD:410581 32/84 (38%)
tom1NP_001338580.1 VHS_Tom1 12..148 CDD:340792 71/137 (52%)
GAT_TOM1_like 203..289 CDD:410581 32/85 (38%)

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