DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3529 and GGA3

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_016879874.1 Gene:GGA3 / 23163 HGNCID:17079 Length:733 Species:Homo sapiens


Alignment Length:608 Identity:132/608 - (21%)
Similarity:229/608 - (37%) Gaps:128/608 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQRIEA----ATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTLT 79
            |:.:|:    ||:.:...|:|...:..||.||:..:..:.|:|.:..::.   .......:..||
Human     6 GESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQ---SPQEWEALQALT 67

  Fly    80 VLETCVKNCGKAFHVLVAQKDFINELVKLIGPK---NDPPAAMQEKVLSLIQIWADAFKNQPDLN 141
            |||.|:||||:.||..|.:..|:|||:|::.||   :.....::.||:.|:..|..|.   |:..
Human    68 VLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PEEA 129

  Fly   142 GVTQMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPP-------------QLVAAQQHTISPQ 193
            .:...|..||.:||      :.:..||...:..:|..||             :|:|....:.:|.
Human   130 KIKDAYHMLKRQGI------VQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNPD 188

  Fly   194 HMAAAAAAAAAAAAPPSTGPLHLTPEQAAKLRS------ELEIVSNNMSILSEMLSVLKPGQESP 252
            .:..|.....:           :..|..|:::.      .||.|:||:.:|||||........|.
Human   189 DLQEANKLIKS-----------MVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSD 242

  Fly   253 DDYALLNELTSTCKEMQSRIVDLIGRVQD-DELTAEFLRINDELNNVFLRHQR-YEKNRSQGQGA 315
            .|..|:.||...|:..:..:..|....:| |....:.|:.:|.|:.|...::. .|.....|:.|
Human   243 GDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEVA 307

  Fly   316 GVTSP--------------------------SAVLGAAMGLPGVGAAGAGATTVATLPPPPTTTA 354
            .:|.|                          |:||..|...|..|        :..|||||..:.
Human   308 TLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSG--------IPILPPPPQASG 364

  Fly   355 VSNTPQSDQLLIDLIESSEE---AQLPQSLGQISLGGGAPIGVQRSARPADEFDMLAQSRTDGNH 416
            ...:..|.|....|..||..   :.|.:.|..:.|...||....:.:....::.:|.:.::|.:.
Human   365 PPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDF 429

  Fly   417 KSDL-------LRDIPSVDAAAGSVTATASPYKPNQPQ-------------QAQRSAGEPPVVSK 461
            .|..       ..|.|.:..:|.|.:::.:|..|..|.             .:..|.|..|.::.
Human   430 FSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAP 494

  Fly   462 STKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEE--------RAAAAENLPTISASNSAASAT 518
            ..:..........||:|.:..::.|     |:.|||        :...:..:||.:.:......:
Human   495 KVEPAVPGHHGLALGNSALHHLDAL-----DQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFS 554

  Fly   519 TGSAGA-------DSLRKTPKKP 534
            ||....       .|....||.|
Human   555 TGPGSPLFQPLSFQSQGSPPKGP 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 43/145 (30%)
GAT_TOM1_like 222..307 CDD:260091 24/92 (26%)
GGA3XP_016879874.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1087
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2130
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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