DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and Tom1

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001129731.1 Gene:Tom1 / 21968 MGIID:1338026 Length:516 Species:Mus musculus


Alignment Length:555 Identity:236/555 - (42%)
Similarity:322/555 - (58%) Gaps:69/555 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVV 74
            |||.||:|||||||.|||.:|.||:||.||||||:|||:.:..:||.||::||:..|  ||...|
Mouse     5 LGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGN--KNFHEV 67

  Fly    75 MYTLTVLETCVKNCGKAFHVLVAQKDFI-NELVKLIGPKNDPPAAMQEKVLSLIQIWADAFKNQP 138
            |..||||||||||||..||||||.:||: |.||:.|.|||:||..:.:|||:|||.|||||::.|
Mouse    68 MLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSP 132

  Fly   139 DLNGVTQMYMELKNKGIEFPANDLDAMAPIYTPQRSV--PEMPPQLVAAQQHTISPQHMAAAAAA 201
            ||.||..:|.:|:.||:|||..|||.::||:||||:|  .|.|.:..:...:|.....::..|..
Mouse   133 DLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSRQNSVSSNTSQRGDLSQHATP 197

  Fly   202 AAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNELTSTCK 266
            ....|..|...|:..||||..|||||||:||.|:.::||||:.|.|.|..|.|..||.||..||:
Mouse   198 LPTPAVLPGDSPITPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQVEPADLELLQELNRTCR 262

  Fly   267 EMQSRIVDLIGRVQDDELTAEFLRINDELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGAAMGLP 331
            .||.||::||.|:.:::||.|.|.|||.||||||||:|:|:.|: ||.|..:|.:.:        
Mouse   263 AMQQRILELIPRISNEQLTEELLMINDNLNNVFLRHERFERFRT-GQTAKASSEAEL-------- 318

  Fly   332 GVGAAGAGATTVATLPPPPTTTAVSNTPQSDQL------LID-----LIESSEEAQLP-QSLGQI 384
                    ||.:..:.|.|..|  :|.  |.||      |:.     |:|..::...| |.||..
Mouse   319 --------ATDLIDMGPDPAAT--NNL--SSQLAGMNNRLLSLSNHFLLEEGKKEWAPLQDLGSR 371

  Fly   385 SLGGGAPIGVQRSARPADEFDMLAQSRTDGNHKSDLLRDI-----PSVDAAAGSVTATASPYKPN 444
            |:..|.. .::.|....|:|||.|.:|  |:..:|..:.:     .:.|..||::.|        
Mouse   372 SVRAGLQ-SLETSGHLEDDFDMFALTR--GSSLADQRKGVKYEAPQTTDGLAGALDA-------- 425

  Fly   445 QPQQAQRSAGEPPVVSKSTKENEIDEMEAWLGSSHIEGIEE---LTSSEFDKFLEERAAAAENLP 506
                .|:|.|..|    :|:...::::|.||.:......||   :||.||||||||||.||:.||
Mouse   426 ----RQQSTGAIP----ATQARIMEDIEQWLSTDVGNSAEEPSGVTSEEFDKFLEERAKAADRLP 482

  Fly   507 TISASNSAASATTGSAGADSLRKTPKKPGAEEDLL 541
            .: ||.||......|.|....|||.:|   ::|:|
Mouse   483 NL-ASPSAEGPPRPSPGTAPRRKTQEK---DDDML 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 85/141 (60%)
GAT_TOM1_like 222..307 CDD:260091 48/84 (57%)
Tom1NP_001129731.1 VHS_Tom1 12..152 CDD:239623 85/141 (60%)
GAT_TOM1 214..308 CDD:260094 53/94 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831179
Domainoid 1 1.000 178 1.000 Domainoid score I3545
eggNOG 1 0.900 - - E1_KOG1087
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 372 1.000 Inparanoid score I2096
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46484
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000599
OrthoInspector 1 1.000 - - otm43099
orthoMCL 1 0.900 - - OOG6_102984
Panther 1 1.100 - - LDO PTHR13856
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X466
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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