DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3529 and apt-9

DIOPT Version :9

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_509853.2 Gene:apt-9 / 189194 WormBaseID:WBGene00000166 Length:588 Species:Caenorhabditis elegans


Alignment Length:526 Identity:103/526 - (19%)
Similarity:166/526 - (31%) Gaps:186/526 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PVGQRIEAATDANLASENWAANMEICDMINES-SDTARDAMRAIRKRLSQNAGKNNQVVMYTLTV 80
            |:...:..|||..:..|.   .::..|.|.|| ......|:.|:.....:.:..:.:..|.|:..
 Worm     8 PIDYWVCRATDRFIGDEE---RIKALDFIIESIYKQPASALLAVDLFSHKLSSPSQEEAMLTIRA 69

  Fly    81 LETCVKNCGKAFHVLVAQKDFINELVKLIGPKND---PPAAMQEKVLSLIQIWADAFKNQPDLNG 142
            |:..|:|.|:..|....:..|:||||:||.||.:   ...|::.:::.|:.||..:.|:.|... 
 Worm    70 LDYLVRNGGEKVHERCGRYKFLNELVRLIAPKYNGKLTSDALKTEIIKLLFIWQLSIKHIPKYK- 133

  Fly   143 VTQMYMELKNKGIEFPANDLDAMAPIYT--PQRSVPEMPPQLVAAQQHTISPQHMAAAAAAAAAA 205
              |:|..||             ::.|.|  |.....|:|                        ..
 Worm   134 --QVYESLK-------------LSKIITDDPHVRETEVP------------------------VF 159

  Fly   206 AAPPSTGPLHLTPEQAAKLRS--------ELEIVSNNMSILSE---------------------- 240
            |.||....:....|||..|::        :||..:|.:..|.|                      
 Worm   160 AVPPVRSSVFDNEEQAVLLKALLSSNRPEDLETANNLIKTLVETEEHKLVKIHERRKKLDHAINL 224

  Fly   241 -----------MLSVLKPGQESPDDYALLNELTSTCKEMQSRIVDLIGRV--QDDELTAEFLRIN 292
                       ....:..|..|||:...|..:|:...::|......:..:  .:|....|.|.||
 Worm   225 CNQVEHLRLDKAAETIGLGNYSPDNELTLQRVTNELIQLQELFYGYVNELAENNDPCLEEVLNIN 289

  Fly   293 DELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGAAMGLPGVG-AAGAGATTVATLPPPPTTTAVS 356
            |::|.|...::                          .|..| .|...|.|  .|.|......|.
 Worm   290 DQINRVLPENE--------------------------TPKCGNRAPISART--QLDPENQELLVF 326

  Fly   357 NTPQSD---------------QLLIDLIESS--EEAQL-----------------PQSLGQISLG 387
            |||.|:               .||.::|||.  ||.::                 |::.|..|: 
 Worm   327 NTPTSEVPPKNGFCDPRDLEGSLLNNMIESEFVEEPKIVPVQQMTPVLNRNSSASPRASGDSSI- 390

  Fly   388 GGAPIGVQRSARPADEFDMLAQSRTDGNHKSDLLRD----------------IPSVDAAAGSVTA 436
                          .|.|.||..|.....|...|.:                :|.:.....|::.
 Worm   391 --------------FETDFLAGKRLPEPLKPPTLNELKPNTTTITLEALEVLVPPMSPEPTSLSP 441

  Fly   437 TASPYK 442
            .|.|.|
 Worm   442 KAIPEK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1 17..158 CDD:239623 37/144 (26%)
GAT_TOM1_like 222..307 CDD:260091 21/127 (17%)
apt-9NP_509853.2 VHS_ENTH_ANTH 8..147 CDD:295355 38/157 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2130
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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