DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YA and NF-YA4

DIOPT Version :9

Sequence 1:NP_648313.1 Gene:Nf-YA / 39091 FlyBaseID:FBgn0035993 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_850235.1 Gene:NF-YA4 / 818037 AraportID:AT2G34720 Length:198 Species:Arabidopsis thaliana


Alignment Length:100 Identity:46/100 - (46%)
Similarity:59/100 - (59%) Gaps:17/100 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 EADEEPLYVNAKQYKRILIRRQARAKLE--SRIPKERCKYLHESRHRHAMNRARGEGGRF----- 342
            :|.|||::||||||..||.|||:|||||  :|..|.:..|:|||||.||:.|.||.||||     
plant    94 DAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK 158

  Fly   343 ----HSAQEKGDQDSSGPEGGS------MPMASSG 367
                |..:|:...|.:..|..|      :.||:||
plant   159 ENGDHKEEEEATSDENTSEASSSLRSEKLAMATSG 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YANP_648313.1 CBF 286..345 CDD:128795 38/69 (55%)
NF-YA4NP_850235.1 CBF 95..156 CDD:128795 37/60 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 76 1.000 Domainoid score I3138
eggNOG 1 0.900 - - E1_COG5224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001472
OrthoInspector 1 1.000 - - otm2717
orthoMCL 1 0.900 - - OOG6_102402
Panther 1 1.100 - - O PTHR12632
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.770

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