DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YA and nfyal

DIOPT Version :9

Sequence 1:NP_648313.1 Gene:Nf-YA / 39091 FlyBaseID:FBgn0035993 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_021333982.1 Gene:nfyal / 573719 ZFINID:ZDB-GENE-040718-491 Length:365 Species:Danio rerio


Alignment Length:356 Identity:121/356 - (33%)
Similarity:146/356 - (41%) Gaps:112/356 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ATAQPIQVIPMPMLPTGAAQIIIGQQPQGQ------------ATATGLQPQLIP-LQANQIMLQ- 119
            |||...|::      ..||...|.||.||.            |||||.|.|.:. :|...:|:| 
Zfish     6 ATASGDQIV------VQAANGQIQQQAQGTVTAVQLQTEAPVATATGQQVQTLQVVQGQPLMVQV 64

  Fly   120 ------AAQQQPQM-QVMQLPDGQTIFYQTPTIAALDPNAAANAAAAMAAQPTPHYLNINGQLVQ 177
                  .:..||.| |.|....||||. |.|.      :.|.........||....|. .||.:|
Zfish    65 SGGQLITSSGQPIMVQAMSGAQGQTIM-QVPV------SGAQGLQQIQLVQPGQIQLQ-GGQTLQ 121

  Fly   178 INPAPSANQAAPTAGQQ------IIMVPQTAMAAVNAAAANAGVGAGVGTVVTQQQQQQHQQVQS 236
            :.            |||      ||..||||:.|          |...|..:|.|.||..|..:.
Zfish   122 LQ------------GQQGQAQQIIIQQPQTAITA----------GQNQGQQITVQGQQVAQTAEG 164

  Fly   237 QTQNQQQQQ------QQQTVAAVAASAAVNNI-----SADVSTSTTGTNT--------------- 275
            ||...|...      ||..:...|.:.|...|     :|:.||:.:|..|               
Zfish   165 QTIVYQPVNADGTVLQQGVITIPAGTLAGTQIVQAAGAANTSTTNSGQGTVTVTLPVSGNMVNAG 229

  Fly   276 -----NSEDESSKGEA----------------DEEPLYVNAKQYKRILIRRQARAKLES--RIPK 317
                 ...||...|..                :|||||||||||.|||.|||||||||:  :|||
Zfish   230 GMVMVRPPDEMVPGSGAVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPK 294

  Fly   318 ERCKYLHESRHRHAMNRARGEGGRFHSAQEK 348
            ||.||||||||:|||.|.||:||||.|.:||
Zfish   295 ERKKYLHESRHKHAMQRKRGDGGRFFSPKEK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YANP_648313.1 CBF 286..345 CDD:128795 46/76 (61%)
nfyalXP_021333982.1 CBFB_NFYA 264..319 CDD:307940 43/54 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595911
Domainoid 1 1.000 91 1.000 Domainoid score I7683
eggNOG 1 0.900 - - E1_COG5224
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4787
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001472
OrthoInspector 1 1.000 - - otm25132
orthoMCL 1 0.900 - - OOG6_102402
Panther 1 1.100 - - LDO PTHR12632
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R547
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.870

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