DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bet3 and trappc3

DIOPT Version :9

Sequence 1:NP_648312.3 Gene:Bet3 / 39090 FlyBaseID:FBgn0260859 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001015966.1 Gene:trappc3 / 548720 XenbaseID:XB-GENE-1003911 Length:180 Species:Xenopus tropicalis


Alignment Length:180 Identity:113/180 - (62%)
Similarity:147/180 - (81%) Gaps:2/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRQASR-LDAKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLARTSA 64
            ||||.:| .::||:|||..||||||||||:.:|:||.||||||||::|||:|:|||||||||:|.
 Frog     1 MSRQTNRGTESKKMNSELFTLTYGALVTQLCKDYENDEDVNKQLEKMGYNIGVRLIEDFLARSSI 65

  Fly    65 PRCLEMRETADRIQQ-AFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDLTNLRYSAI 128
            .||.:.|||||.|.: ||::||.|.|||:|||||.|||||:.::|||.:|||||.:.:.|.||.:
 Frog    66 GRCHDFRETADVIAKVAFKMYLGITPTITNWSPAGDEFSLILENNPLVDFVELPDNHSTLVYSNL 130

  Fly   129 LSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVRRLEEVIPAGED 178
            |.|.:||||||||:.|...|.||.||||:|||:|:||:||:|:.:||||:
 Frog   131 LCGVLRGALEMVQMAVDVKFAQDTLKGDSVTEIRMKFIRRIEDNLPAGEE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bet3NP_648312.3 TRAPPC3_bet3 14..167 CDD:271345 99/153 (65%)
trappc3NP_001015966.1 TRAPPC3_bet3 15..169 CDD:271345 99/153 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I3183
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6399
Inparanoid 1 1.050 218 1.000 Inparanoid score I3486
OMA 1 1.010 - - QHG54086
OrthoDB 1 1.010 - - D1334804at2759
OrthoFinder 1 1.000 - - FOG0002640
OrthoInspector 1 1.000 - - oto105175
Panther 1 1.100 - - LDO PTHR13048
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R136
SonicParanoid 1 1.000 - - X1739
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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