DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bet3 and trappc6bl

DIOPT Version :9

Sequence 1:NP_648312.3 Gene:Bet3 / 39090 FlyBaseID:FBgn0260859 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_956955.1 Gene:trappc6bl / 393634 ZFINID:ZDB-GENE-040426-1602 Length:161 Species:Danio rerio


Alignment Length:148 Identity:34/148 - (22%)
Similarity:62/148 - (41%) Gaps:36/148 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EFLTLTYGALVTQMLRDFENAEDVNKQ-------LERIGYNMGMRLIEDFLARTSAPRCLEMRET 73
            |||.:   .:|..:.::....:|::|:       ||.:|:.:|..|||.|     ...|...::.
Zfish     8 EFLHM---EIVAHVYKEQATRDDIDKERVTCVSTLELMGFRVGQGLIERF-----TKDCPTFKDD 64

  Fly    74 ADRI-------------QQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDLTNLRY 125
            .|.:             :|...:..|.|.|   :....::|:|:...:...:::|..|     :|
Zfish    65 LDIMKFVCKDFWSTIFKKQIDNLRTNHQGT---YVLQDNKFALLTQFSSGKQYLEEAP-----KY 121

  Fly   126 SAILSGCIRGALEMVQLE 143
            .|...|.|||||..:.||
Zfish   122 LAFSCGMIRGALSNLGLE 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bet3NP_648312.3 TRAPPC3_bet3 14..167 CDD:271345 34/148 (23%)
trappc6blNP_956955.1 TRAPPC6A_Trs33 3..159 CDD:271347 34/148 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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