DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bet3 and TRAPPC5

DIOPT Version :9

Sequence 1:NP_648312.3 Gene:Bet3 / 39090 FlyBaseID:FBgn0260859 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001035926.1 Gene:TRAPPC5 / 126003 HGNCID:23067 Length:188 Species:Homo sapiens


Alignment Length:191 Identity:35/191 - (18%)
Similarity:67/191 - (35%) Gaps:60/191 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLARTSAPRCLEMRET--- 73
            :|:.....|.:..||........:..::..:|..:|..:|.|:::..:||....|    |||   
Human    23 EVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDALVAREKGAR----RETKVL 83

  Fly    74 ------------------ADRIQQAFRIYLNIQPTISNWSPASDEFS--LVFDSNPL-TEFVELP 117
                              ||:::|                 |:|:..  .:.:..|| ..::.:|
Human    84 GALLFVKGAVWKALFGKEADKLEQ-----------------ANDDARTFYIIEREPLINTYISVP 131

  Fly   118 PDLTNLRYSAILSGCIRGALEMVQLEVQC---WFVQDQLKGDNVTELRVKFVRRLEEVIPA 175
            .:.:.|..::..:|.:...|.......:.   |.     ||   |.|.:||    ||.:.|
Human   132 KENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWH-----KG---TTLMIKF----EEAVIA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bet3NP_648312.3 TRAPPC3_bet3 14..167 CDD:271345 31/179 (17%)
TRAPPC5NP_001035926.1 TRAPPC5_Trs31 24..175 CDD:271346 32/183 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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