Sequence 1: | XP_011524280.1 | Gene: | LAMA3 / 3909 | HGNCID: | 6483 | Length: | 3342 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285243.1 | Gene: | NetA / 32398 | FlyBaseID: | FBgn0015773 | Length: | 726 | Species: | Drosophila melanogaster |
Alignment Length: | 714 | Identity: | 180/714 - (25%) |
---|---|---|---|
Similarity: | 289/714 - (40%) | Gaps: | 192/714 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 32 CGATARDPGAAAGLSLHPTYFNLAEAARIWATATCGERGPGEGRPQPELYCKLVGGPTAPGSGHT 96
Human 97 IQGQFCDYCNSEDPRKAHPVTNAID----GSERWWQSPPLS-SGTQYNRVNLTLDLGQLFHVAYI 156
Human 157 LIKFA-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGREANMAVTR--DDDVLCVTEY 218
Human 219 SRIVPLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLR-----------------TN 266
Human 267 TLLGHLISKAQRDP--------------TVTRRYYYSIKDISIGGQCVCNGHAEVCNINNPEKLF 317
Human 318 RCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLNTQG 382
Human 383 IYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDPEHADG--CEQGSGRCHC 445
Human 446 KPNFHGDNCEKCAIGYY----NFPFCLRIPIFPV-------STPSSEDPVAGDIKGCDCN----- 494
Human 495 --------LEGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSFPICQAC------WCSALGSYQ 545
Human 546 MPCSSVTGQCECR---PGVTGQRCDRC--------LSGAYDF---------PHCQG--------- 581
Human 582 ------------SSSACDPAGTINSNLGYCQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKC 633 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LAMA3 | XP_011524280.1 | LamNT | 46..297 | CDD:214532 | 71/289 (25%) |
EGF_Lam | 299..344 | CDD:238012 | 19/44 (43%) | ||
Laminin_EGF | 356..423 | CDD:278482 | 26/66 (39%) | ||
EGF_Lam | 425..465 | CDD:238012 | 16/45 (36%) | ||
Laminin_EGF | 491..538 | CDD:278482 | 9/65 (14%) | ||
EGF_Lam | 535..577 | CDD:238012 | 10/67 (15%) | ||
Laminin_EGF | 585..628 | CDD:278482 | 8/42 (19%) | ||
EGF_Lam | 631..682 | CDD:238012 | 2/3 (67%) | ||
EGF_Lam | 684..727 | CDD:238012 | |||
Laminin_EGF | 1275..1323 | CDD:278482 | |||
EGF_Lam | 1365..1410 | CDD:238012 | |||
EGF_Lam | 1413..1463 | CDD:238012 | |||
LamB | 1523..1650 | CDD:214597 | |||
EGF_Lam | 1695..1741 | CDD:238012 | |||
Laminin_EGF | 1743..1793 | CDD:278482 | |||
Laminin_I | 1854..2113 | CDD:283627 | |||
Laminin_I | 2071..2357 | CDD:283627 | |||
ApoLp-III_like | 2101..2265 | CDD:304399 | |||
Laminin_II | 2297..2425 | CDD:283628 | |||
LamG | 2444..2579 | CDD:214598 | |||
LamG | 2611..2751 | CDD:238058 | |||
LamG | 2778..2910 | CDD:238058 | |||
LamG | 3003..3143 | CDD:238058 | |||
LamG | 3167..3318 | CDD:238058 | |||
NetA | NP_001285243.1 | LamNT | 44..280 | CDD:214532 | 68/268 (25%) |
EGF_Lam | 312..357 | CDD:238012 | 19/45 (42%) | ||
EGF_Lam | 369..426 | CDD:238012 | 26/63 (41%) | ||
EGF_Lam | 431..479 | CDD:238012 | 16/47 (34%) | ||
NTR_netrin-1_like | 545..723 | CDD:239634 | 25/149 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |