DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTF-1 and sqz

DIOPT Version :9

Sequence 1:NP_001097560.1 Gene:MTF-1 / 39089 FlyBaseID:FBgn0040305 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster


Alignment Length:601 Identity:131/601 - (21%)
Similarity:196/601 - (32%) Gaps:225/601 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 HSEVPLIASLSDI-TAQV------FNLDD----ICFTLEYQFEN-------QRLVQVQP-PTVVS 227
            |..:..:.||..: |||:      ||:.:    :...|:|..:|       |.:::.|| |....
  Fly    18 HRSIDQLRSLGHLTTAQLVHDYKPFNISEFRQNVAERLDYSLKNGLVQHQQQMVMEQQPHPDQQQ 82

  Fly   228 LSMVSSPNEAANPPINCDNDQGTGNSISRDSTSNSPAYFTIETSYVDEYDPNEPDEDEQLAHCIQ 292
            ...:..|.:..:||         ...:|. |..|||.  |.......:||||.....:|::....
  Fly    83 QQHLHHPQQQQHPP---------QLKVSY-SAPNSPP--TPHEQQEQKYDPNRSPPRQQMSSASG 135

  Fly   293 PGVLHQDVDEEEVERQDENDQLMALAYESSDEALSRYRCNYENCYRSYSTIGNLRTHLKTHTGDY 357
            .|  ......||..|:.:.||            ...|:|.                         
  Fly   136 SG--SNGSSPEEESRRGDGDQ------------AKPYKCG------------------------- 161

  Fly   358 SFKCPEDGCHKAFLTSYSLKIHVRVHTKVKPYECEVSGCDKAFNTRYRLHAHLRLHNGETFNCEL 422
                   .|.|:|..|..|..|.|:|..:|||.||:                             
  Fly   162 -------SCSKSFANSSYLSQHTRIHLGIKPYRCEI----------------------------- 190

  Fly   423 CQKCFTTLSDLKKHMRTHTQERPYKCPEDDCGKAFTASHHLKTHRRTHTGEKPYPCQEDSCQKSF 487
            ||:.||.||.|::|:||||.::||||....|.|||:...:|::|.|.|..:||:.|  :||.|.|
  Fly   191 CQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKC--NSCYKCF 253

  Fly   488 S---------TSHSLKSHKKTH---------------QRQLQ---NKGRKKRPLKTQQTKCSDQ- 524
            |         ..|....|.|||               |:.||   .|..|::...|.|.....| 
  Fly   254 SDEMTLLEHIPKHKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQQHRHTAQVAAHQQH 318

  Fly   525 ---------------------------------------EQKDP--------------QQEEQEE 536
                                                   :|:.|              ||.:|::
  Fly   319 VPASGIGLNLQRQAMNDVNAAYWAKMGADSAAASLAEAIQQQLPQAGGQPYGNFASLQQQHQQQQ 383

  Fly   537 EEFIKEDQPEMTLLNPG-SHCSETTSTDSGVVLQTLTPQDHLSNVFILQGNEPLILPETSQAYQL 600
            :|.:...:...|   || ||.....:....:||:..|||.||......|        :..||.|.
  Fly   384 QELLHHQRLADT---PGHSHSPHEEAAGEDLVLRQSTPQHHLQQQQQQQ--------QQQQAQQQ 437

  Fly   601 SYAAEEEIPSPWIDAGVLVSKPIIPMAPLTD-------------------ACVALPTEMPSFVNL 646
            ..|..:..|.|...|...:|..:.|...|..                   |..|.||::.|...:
  Fly   438 QQAQHQPSPGPGNSAFTPLSATVAPPPHLQQHRGPPGSAAAYLYQQNAAAAAAAFPTQLISLHQI 502

  Fly   647 K-----PTFGNAVSGN 657
            :     |.....::|:
  Fly   503 RNYAHQPGAAGLIAGD 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTF-1NP_001097560.1 zf-C2H2_aberr 329..471 CDD:293622 38/141 (27%)
C2H2 Zn finger 331..353 CDD:275368 1/21 (5%)
zf-H2C2_2 345..372 CDD:290200 3/26 (12%)
C2H2 Zn finger 361..383 CDD:275368 7/21 (33%)
zf-H2C2_2 375..402 CDD:290200 9/26 (35%)
C2H2 Zn finger 391..413 CDD:275368 2/21 (10%)
zf-C2H2 418..440 CDD:278523 9/21 (43%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
zf-H2C2_2 432..458 CDD:290200 13/25 (52%)
COG5048 442..>519 CDD:227381 31/103 (30%)
C2H2 Zn finger 448..470 CDD:275368 8/21 (38%)
zf-H2C2_2 462..489 CDD:290200 12/35 (34%)
C2H2 Zn finger 478..500 CDD:275368 9/30 (30%)
DUF3682 862..>931 CDD:289231
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 8/51 (16%)
zf-H2C2_2 172..197 CDD:290200 12/53 (23%)
zf-C2H2 186..208 CDD:278523 12/50 (24%)
C2H2 Zn finger 188..208 CDD:275368 11/48 (23%)
zf-C2H2_8 191..271 CDD:292531 33/81 (41%)
zf-H2C2_2 200..227 CDD:290200 14/26 (54%)
C2H2 Zn finger 216..238 CDD:275368 8/21 (38%)
C2H2 Zn finger 246..266 CDD:275368 6/21 (29%)
C2H2 Zn finger 277..297 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457121
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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