DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTF-1 and pad

DIOPT Version :9

Sequence 1:NP_001097560.1 Gene:MTF-1 / 39089 FlyBaseID:FBgn0040305 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster


Alignment Length:700 Identity:150/700 - (21%)
Similarity:223/700 - (31%) Gaps:241/700 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QEKQHQQQQQHYFHSEWKTTANSHGNSLSDSRDYDTNSSRNSLSGSPPVTSNCSSSGSLDFDRPL 68
            |:.|.|||.|...:....||      ..|.::| ||:||.:  |..|.:....||..:..|...:
  Fly   245 QQLQLQQQLQQLTNQLQATT------QYSVAQD-DTSSSGD--SKKPKLNFVLSSPTAPQFTTSM 300

  Fly    69 AQL--LEPKLEADGLGIIHGDNYSIYGSQTAESTSGEQQVLNLGLTLDTGDAQATYGDLFGAQD- 130
            .|.  .:|:::   |.::.|.     |..|:..|...|..||         |.|....|.|.|. 
  Fly   301 PQFGGSQPQIQ---LQLMPGS-----GGVTSAGTVPAQTQLN---------AAALLSSLAGPQST 348

  Fly   131 -----------QLTASQTHGHSQVVVSAAADN---------------AFSLAD-----QLTPLPI 164
                       .:|....:...|:|......|               ..:.||     ||||   
  Fly   349 TNLLSPNKCFLPITIRDENSDQQIVAHIDTKNLVLPTTYQVQMKLQPQLATADGQPIMQLTP--- 410

  Fly   165 TVIPITYHHTTENLSSSHS---------------EVPL--IASLSDITAQVFNLDDICFTLEYQF 212
            |.||.|...|.:.|.:..|               :.||  :.:.:.:|:|.........|...|.
  Fly   411 TSIPATLQLTPQTLGNPGSAFQGTTVTQNQFLAPQQPLTQLPNTAQVTSQQIIRSPHTSTTNSQL 475

  Fly   213 --------------------------------------------------------ENQRLV--- 218
                                                                    |.:||:   
  Fly   476 VIRNVTNIPPTPTTPTSSKKAPTFKTPSPKQKPMPSPKSKTTVGPSSGGSNGTSTNEFKRLITQT 540

  Fly   219 ----QVQPPTVVSLSMVSSP-----NEAA--------------NPPINCDNDQGTGN-------- 252
                ||:......||...:|     |:||              ..|.:......|.|        
  Fly   541 KPQPQVKQQQTAGLSASGAPTATSANQAAMQRLSSNTTITKVPKQPASLPAPAPTSNPAKLPMLN 605

  Fly   253 ----SISR-------------DSTSNSPAYFTIETSYVDEYDPNEPDEDEQLAHCIQPGVLHQDV 300
                :|||             .:||.:||...|..|.........|....|....::....:||.
  Fly   606 KQNITISRISMQTAPKAQSKPSTTSPTPASQPIPVSVPALSQAQPPPLAAQHKKIVRKPPENQDT 670

  Fly   301 DEEEVERQDENDQLMALAYESSDEALSRYRCNYENCYRSYSTIGNLRTHLKTHTGDYS-----FK 360
            ..::|:......|::....:....|                          ||:|..:     ..
  Fly   671 SGQKVKAARPPQQILPSPQQEGQNA--------------------------THSGSEAPTTSGLI 709

  Fly   361 CPEDGCHKAFLTSYSLKIHVRVHTKVKPYECEVSGCDKAFNTRYRLHAHLRLHNGE-TFNCELCQ 424
            ||.  |.:.|.....|..||::|..::|::|...||||.|:.:..|..||..|:|: .:.||:|:
  Fly   710 CPT--CKREFKKKEHLTQHVKLHAGLRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTCEVCK 772

  Fly   425 KCFTTLSDLKKHMRTHTQ---ERPYKCPEDDCGKAFTASHHLKTHRRTHTGEKPYPCQEDSCQKS 486
            |.|:...:|.||.|.|||   |..|.|  |.|.|.|....|.:.||..|...:|     :|....
  Fly   773 KPFSRKDNLNKHRRIHTQTSTETLYCC--DVCNKNFATKLHYEKHREMHKKIRP-----ESAAPG 830

  Fly   487 FSTSHSLKSHKKTHQR---QLQNKG--RKKRPLKTQQTKCSDQEQKDPQQ 531
             :|:....:...||.|   |:.||.  ..|:....|||    |.|:.|.|
  Fly   831 -ATASPAAAPALTHVRSNGQVPNKAVFEIKQERSAQQT----QTQQPPAQ 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTF-1NP_001097560.1 zf-C2H2_aberr 329..471 CDD:293622 45/150 (30%)
C2H2 Zn finger 331..353 CDD:275368 0/21 (0%)
zf-H2C2_2 345..372 CDD:290200 7/31 (23%)
C2H2 Zn finger 361..383 CDD:275368 7/21 (33%)
zf-H2C2_2 375..402 CDD:290200 11/26 (42%)
C2H2 Zn finger 391..413 CDD:275368 9/21 (43%)
zf-C2H2 418..440 CDD:278523 9/21 (43%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
zf-H2C2_2 432..458 CDD:290200 13/28 (46%)
COG5048 442..>519 CDD:227381 23/84 (27%)
C2H2 Zn finger 448..470 CDD:275368 8/21 (38%)
zf-H2C2_2 462..489 CDD:290200 6/26 (23%)
C2H2 Zn finger 478..500 CDD:275368 2/21 (10%)
DUF3682 862..>931 CDD:289231
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368 7/21 (33%)
zf-C2H2 736..760 CDD:278523 9/23 (39%)
C2H2 Zn finger 738..760 CDD:275368 9/21 (43%)
zf-H2C2_2 752..777 CDD:290200 10/24 (42%)
zf-C2H2 766..788 CDD:278523 9/21 (43%)
C2H2 Zn finger 768..788 CDD:275368 9/19 (47%)
zf-H2C2_2 780..808 CDD:290200 14/29 (48%)
C2H2 Zn finger 799..819 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24377
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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