DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS17 and AT5G04800

DIOPT Version :10

Sequence 1:NP_524002.1 Gene:RpS17 / 39088 FlyBaseID:FBgn0005533 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_196100.1 Gene:AT5G04800 / 830359 AraportID:AT5G04800 Length:141 Species:Arabidopsis thaliana


Alignment Length:122 Identity:76/122 - (62%)
Similarity:97/122 - (79%) Gaps:0/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQ 65
            |||||||||||:::.:|||||:|:||||||||:|.|||||||:|.|||||||:.||||.|::...
plant     1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGP 65

  Fly    66 VRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122
            |||||:||||||||||.::||..||::.|.|:||.:|.|||..|...:..|:...:|
plant    66 VRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEP 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS17NP_524002.1 Ribosomal_S17e 1..122 CDD:425895 75/120 (63%)
AT5G04800NP_196100.1 Ribosomal_S17e 1..122 CDD:425895 75/120 (63%)

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