DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS17 and zgc:114188

DIOPT Version :9

Sequence 1:NP_524002.1 Gene:RpS17 / 39088 FlyBaseID:FBgn0005533 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_001013473.1 Gene:zgc:114188 / 541327 ZFINID:ZDB-GENE-050320-15 Length:134 Species:Danio rerio


Alignment Length:122 Identity:99/122 - (81%)
Similarity:110/122 - (90%) Gaps:0/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQ 65
            |||||||||||||:||||||||||..|||||||:|||:||||:|.|||||||||||||.|::...
Zfish     1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGP 65

  Fly    66 VRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122
            |||||||||||||||||||||.||||:|:|||||.|||||||||||.::..||:|||
Zfish    66 VRGISIKLQEEERERRDNYVPEVSALDQEIIEVDTDTKEMLKLLDFGSLSNLQVTQP 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS17NP_524002.1 Ribosomal_S17e 1..122 CDD:395671 97/120 (81%)
zgc:114188NP_001013473.1 Ribosomal_S17e 1..122 CDD:395671 97/120 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594988
Domainoid 1 1.000 197 1.000 Domainoid score I3061
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3748
OMA 1 1.010 - - QHG53898
OrthoDB 1 1.010 - - D1459807at2759
OrthoFinder 1 1.000 - - FOG0001108
OrthoInspector 1 1.000 - - otm24797
orthoMCL 1 0.900 - - OOG6_100832
Panther 1 1.100 - - LDO PTHR10732
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1234
SonicParanoid 1 1.000 - - X671
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.