DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS17 and LOC100365810

DIOPT Version :9

Sequence 1:NP_524002.1 Gene:RpS17 / 39088 FlyBaseID:FBgn0005533 Length:131 Species:Drosophila melanogaster
Sequence 2:XP_006243666.1 Gene:LOC100365810 / 100365810 RGDID:2318277 Length:135 Species:Rattus norvegicus


Alignment Length:128 Identity:101/128 - (78%)
Similarity:112/128 - (87%) Gaps:1/128 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQ 65
            |||||||||||||:||||||||||..|||||||:|||:||||:|.|||||||||||||.|::...
  Rat     1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGP 65

  Fly    66 VRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTN-NF 127
            |||||||||||||||||||||.||||:|:|||||.|||||||||||.::..||:|||... ||
  Rat    66 VRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNF 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS17NP_524002.1 Ribosomal_S17e 1..122 CDD:395671 97/120 (81%)
LOC100365810XP_006243666.1 Ribosomal_S17e 1..122 CDD:395671 97/120 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353013
Domainoid 1 1.000 196 1.000 Domainoid score I3029
eggNOG 1 0.900 - - E1_COG1383
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H137322
Inparanoid 1 1.050 199 1.000 Inparanoid score I3714
OMA 1 1.010 - - QHG53898
OrthoDB 1 1.010 - - D1459807at2759
OrthoFinder 1 1.000 - - FOG0001108
OrthoInspector 1 1.000 - - otm45744
orthoMCL 1 0.900 - - OOG6_100832
Panther 1 1.100 - - LDO PTHR10732
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X671
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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