DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf5 and AT4G25550

DIOPT Version :10

Sequence 1:NP_001036597.1 Gene:Cpsf5 / 39083 FlyBaseID:FBgn0288470 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_194285.2 Gene:AT4G25550 / 828660 AraportID:AT4G25550 Length:200 Species:Arabidopsis thaliana


Alignment Length:195 Identity:114/195 - (58%)
Similarity:141/195 - (72%) Gaps:1/195 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
            :.:::.:|.|||:||:||||||..|||.||..|..||:..:.:.|||.||||:|||.||..||:|
plant     1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65

  Fly   106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETL-GRQDGVKQEWIVEDTIGNWWRPNFEPPQYP 169
            |||:|.||.|||||.|..||:|.:||||.|:..| |....:..:|.|.:.:..|||||||...||
plant    66 LLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPNFETMMYP 130

  Fly   170 YIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFNF 234
            |.|||||||||.|||::|.|.||..||||||.||:|.||||||||.|.|||:||::||.|.||:|
plant   131 YCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFHF 195

  Fly   235  234
            plant   196  195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf5NP_001036597.1 NUDIX_Cfim25_Nudt21 49..231 CDD:467583 110/182 (60%)
AT4G25550NP_194285.2 NUDIX_Cfim25_Nudt21 10..192 CDD:467583 110/181 (61%)

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