DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf5 and Nudt21

DIOPT Version :9

Sequence 1:NP_001036597.1 Gene:Cpsf5 / 39083 FlyBaseID:FBgn0035987 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_006255194.1 Gene:Nudt21 / 291877 RGDID:1305766 Length:232 Species:Rattus norvegicus


Alignment Length:227 Identity:174/227 - (76%)
Similarity:191/227 - (84%) Gaps:13/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NKSGSGWPRRGSQGQADAASSNNNGTQKYTNQA--LTINRTINLYPLTNYTFGTKEPLFEKDPSV 70
            |:|.:||||           ..|....||..|.  ||:.|||||||||||||||||||:|||.||
  Rat     7 NRSQTGWPR-----------GVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV 60

  Fly    71 PSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLL 135
            .:||||||||||:|||||:|||||:||||.||||||||||||||||||||||.|||||||||||:
  Rat    61 AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLM 125

  Fly   136 SETLGRQDGVKQEWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKN 200
            :|.|||||||.|:|:::|.||||||||||||||||||.|||||||||:||||||.||||||||||
  Rat   126 TEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKN 190

  Fly   201 YKLVAAPLFELYDNSQGYGPIISSLPQALCRF 232
            ||||||||||||||:.|||||||||||.|.|:
  Rat   191 YKLVAAPLFELYDNAPGYGPIISSLPQLLSRY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf5NP_001036597.1 NUDIX_2 45..232 CDD:404710 161/186 (87%)
Nudt21XP_006255194.1 NUDIX_2 35..222 CDD:290580 161/186 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346080
Domainoid 1 1.000 346 1.000 Domainoid score I1015
eggNOG 1 0.900 - - E1_KOG1689
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5090
Inparanoid 1 1.050 368 1.000 Inparanoid score I2079
OMA 1 1.010 - - QHG54579
OrthoDB 1 1.010 - - D1194206at2759
OrthoFinder 1 1.000 - - FOG0006316
OrthoInspector 1 1.000 - - oto97096
orthoMCL 1 0.900 - - OOG6_102904
Panther 1 1.100 - - LDO PTHR13047
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4023
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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