DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4022 and Pih1d2

DIOPT Version :9

Sequence 1:NP_001246696.1 Gene:CG4022 / 39082 FlyBaseID:FBgn0035986 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001178722.1 Gene:Pih1d2 / 315645 RGDID:1310503 Length:315 Species:Rattus norvegicus


Alignment Length:266 Identity:65/266 - (24%)
Similarity:106/266 - (39%) Gaps:68/266 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PQPHMCIRTTTEAGEE--LFINVLSWTRIVIPQEPSDPIPLYGGMRVPPGSPRSPP--IVFAVMA 166
            |:|.:|::|.....:|  ||||:..|.||..||..:.|:|:..|.  |...|.:..  .:..|..
  Rat    48 PEPQLCLQTKILKPKEKVLFINLCQWERIPAPQSATHPVPISVGR--PEDFPETSDACTIIDVAY 110

  Fly   167 NPEVL----KDSGRHSKDPEERRAM--VELMCDFVEAMNPGVKLVRNAVILKDRDISGELKDVWN 225
            ||.||    ||.|  .||...|.||  :|.......|.:..|...|         :.|.:     
  Rat   111 NPGVLQAAEKDQG--IKDQLIRMAMRCIEERLQLTLAHSYHVTHFR---------VKGSI----- 159

  Fly   226 AVQAQRDREREEQMMQQRQQQHYQNITTQQMFPKSPDASRAASAGAAVNEASSPPAHLSEPLLVE 290
                ||.:||...:     :.|:.|.  ::|..|.....|..|:      ..|.|:||.|.||.:
  Rat   160 ----QRMKERLMGI-----KTHFPNF--KEMMRKDNTLERIRSS------TVSEPSHLPEVLLTK 207

  Fly   291 QGNGNGNGITLAVFAQQLDNKVASEQGEQQEQSPVSEDACV-DQTDAGSSLNGSTTVLDNQPVAV 354
            :        .::...:.|..::||.:.:.:.::|..|...| ||.:              :|:.:
  Rat   208 K--------QVSAKGRCLIEEIASSEVQVEAKTPAYELKVVKDQNE--------------KPLKI 250

  Fly   355 ENEPEV 360
            |.:.|:
  Rat   251 ELKVEL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4022NP_001246696.1 alpha-crystallin-Hsps_p23-like 106..>196 CDD:294116 33/99 (33%)
Pih1d2NP_001178722.1 alpha-crystallin-Hsps_p23-like 25..313 CDD:294116 65/266 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337288
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22997
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.990

Return to query results.
Submit another query.