Sequence 1: | XP_016866340.1 | Gene: | LAMA2 / 3908 | HGNCID: | 6482 | Length: | 3212 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 3490 | Identity: | 1023/3490 - (29%) |
---|---|---|---|
Similarity: | 1580/3490 - (45%) | Gaps: | 593/3490 - (16%) |
- Green bases have known domain annotations that are detailed below.
Human 40 GLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQRHPITNA 104
Human 105 IDG----------KNTWWQSPSIKNGIEYHYVTITLDLQQVFQIAYVIVKAANSPRPGNWILERS 159
Human 160 LDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHISLINGR 224
Human 225 PSADDPSPELLEFTSARYIRLRFQRIR-TLNADLMMFAHKDPREID-----PIVTRRYYYSVKDI 283
Human 284 SVGGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNC 348
Human 349 HGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGVSPNYPRPC 413
Human 414 QPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYTGYPDCKACNCSGLGS 478
Human 479 -KNEDPCFGPCICKENVEGGDCSRCKSGFFNLQEDNWKGCDECFCSGVSNRCQSSYWTYGKIQDM 542
Human 543 SGWYLTDLPGRIRVAPQQDDLDSPQQISISNAEARQALPHSYYWSAPAPYLGNKLPAVGGQLTFT 607
Human 608 ISYDLEEEEEDTERVLQLMIILEG-NDLSISTAQDEV-----------------YLHPSEEHTNV 654
Human 655 LLLKEESFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAIFRLSSVNLESAVSY----PT 715
Human 716 DGSIAAAVEVCQCPPGYTGSSCESCWPRHRRV-NGTIFGGI---CEPCQCFGHAESCDDVTGECL 776
Human 777 NCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSNNFSPTCHLD-------------- 827
Human 828 RSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLICK 892
Human 893 PGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKPNM 957
Human 958 WRDPEKRFCVLCDCDPVGS-VSPQCD-ITGRCVCKSGFVGKQCN--------LGRQVHQQEEQPR 1012
Human 1013 RAQRVLGSPQRW-----------------------AIGS-SSGCPRGAYRAPAPA---------- 1043
Human 1044 --GTFGLQSARGCVPCNCNSFGSKSFDCEE-SGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACE 1105
Human 1106 -CSHLGNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQC 1169
Human 1170 NCHPKFSGAKCTECSRGHWNYPRCNLCDC-----FLPGTDATTCDSETKKCSCSDQTGQCTCKVN 1229
Human 1230 VEGIHCDRCRPGKFGLDAKNPLGCSSCYCFGTTTQCSEAKGLIRTWVTLKAEQTILPLVDEALQH 1294
Human 1295 TTTKG-----IVFQHPEIVAHMDLMREDLHLE-------------------------PFYWKLPE 1329
Human 1330 QFEGKKLMAYGGKLKYAIYFEAREETGFSTYNPQVIIRGGTPTHARIIVRHMAAPLIGQL----- 1389
Human 1390 ----------------TRHEIEMTEKEWKYYGDDPRVHRTVTREDFLDILYDIHYILIKA-TYGN 1437
Human 1438 FMRQSRISEISMEVAEQGRGTTMTPPADLIEKCDCPLGYSGLSCEACLPG--FYRLRSQPGGRTP 1500
Human 1501 GPT----------LGTCVPCQCNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPND 1555
Human 1556 CQQCACPLISSSNNFSPSC-VAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGN-PGGSCQECE 1618
Human 1619 CDPYGSLPVPCDPVTGFCTCRPGATGRKCDGC---KHWHAREGWECVFCGDECTGLLLGDLA--- 1677
Human 1678 -RLEQMVMSINLTGPLPAPYKMLYGLENMTQEL--KHLLSPQRAPERLIQLAEGNLNTLVTEMNE 1739
Human 1740 LLTRATKVTAD-GEQ------TGQDAERTNTRAKSLG----EFIKELARDAEAVNEKAIKLNETL 1793
Human 1794 GTRDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGESRGENEEM 1858
Human 1859 EKDLRE---KLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIEN 1920
Human 1921 T----LKEGNDIL----DEANRLADEINSIIDYVEDIQTKLPPMSEELNDKIDDLSQEIKDRKLA 1977
Human 1978 EKVSQAESHAAQLNDSSAVLDGILDEAKNISFNATAAFKAYSNIKDYIDEAEKVAKEAKDLAHEA 2042
Human 2043 TK-LATGPRGLLKEDAKGCLQKSFRILNEAKK-------LANDVKENEDHLNGLKTRIENADARN 2099
Human 2100 GDLLRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVLAQI---TELHQNLDGLKKNYNK 2161
Human 2162 LAD-------------SVAKTNAVVKDPSKNKIIADADATVKNLEQEADRLIDKLKPIKELEDN- 2212
Human 2213 LKKNISEIKELINQARKQANSIKVSVSS-GGDCIRTYKPEIKKGSYNNIVVNVKTAVADNL---- 2272
Human 2273 LFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYP------DLTIDDSYWYRIVASRTGRNG 2331
Human 2332 TISVRALDGPKASIVPSTHHSTSPPGYTIL--DVDANAMLF---------VGGLTGK-LKKADAV 2384
Human 2385 RVITFTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQ-FDGEGYA--LVSRPIR 2446
Human 2447 WYPNISTVMFKFRTFSSSALLMYLATRDLRD-FMSVELTDGHIKVSYDLG-SGMASVVSNQNHND 2509
Human 2510 GKWKSFTLSR---IQKQANISIVDIDTNQEENIATSSSGNNFGLDLKADDKIYFGGLPTLRNLSM 2571
Human 2572 KARPEVNLKKYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVYT-VSFPKPGFVELSPVPID 2635
Human 2636 VGTEINLSFSTKNESGIILLGSGGTPAPPR---RKRRQTGQAYYAILLNRGRLEVHLSTGARTMR 2697
Human 2698 KIVIRPEPNLFHDGREHSVHVERTRGIFTVQVDENRRYMQNL-----TVEQPIEVKKLFVGGAPP 2757
Human 2758 EFQPSPLRNIPPF---EGCIWNLVINSVPMDFARPVSFKNADIGRCAHQKLREDEDGAAPAEIVI 2819
Human 2820 QPEPVPTPAFPTPTPVLTHGPCAAESEP-ALLIGSKQFGLS-----------RNSHIAIAFDDTK 2872
Human 2873 VKNRLTIELEVRTEAESGLLFYM--ARINHADFATVQLRNGLPYFSYDL-----GSGDTHTMIPT 2930
Human 2931 KINDGQWHKIKIMRSKQEGILYVD-GASNRTIS-----PKKADILDVVGMLYVGGLPINYTTRRI 2989
Human 2990 GPVTYSID---------GCVRNLHMAEAPADLEQPTSSFHVGTCFANAQRGTYFDGTGFAKAVGG 3045
Human 3046 FKVGLDLLVEFEFRTTTTTGVLLGISSQK-MDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGH 3109
Human 3110 --LCDGQWHKVTANKIKHRIELTVD--------GNQVEAQSPNPASTSADTNDPVFVGGFPDDLK 3164
Human 3165 QFGLTTSIPFRGCIRSLKLTKGTGKPLEVNFAKALELRGVQPVSC 3209 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LAMA2 | XP_016866340.1 | None | |||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 98/248 (40%) |
EGF_Lam | 401..450 | CDD:238012 | 21/53 (40%) | ||
TNFRSF | <407..507 | CDD:304602 | 44/120 (37%) | ||
EGF_Lam | 505..552 | CDD:238012 | 24/57 (42%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 20/46 (43%) | ||
Laminin_B | 660..798 | CDD:278481 | 37/145 (26%) | ||
EGF_Lam | 851..900 | CDD:238012 | 22/48 (46%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 15/27 (56%) | ||
VSP | 953..1414 | CDD:146106 | 169/484 (35%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 18/52 (35%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 20/49 (41%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 17/39 (44%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 9/46 (20%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 19/47 (40%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 21/44 (48%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 22/61 (36%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 31/149 (21%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 25/47 (53%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 21/53 (40%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 20/48 (42%) | ||
CrfC | <1933..2267 | CDD:223771 | 84/372 (23%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 28/137 (20%) | ||
LamG | 2399..>2492 | CDD:304605 | 24/95 (25%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 32/140 (23%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 39/148 (26%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 34/161 (21%) | ||
LamG | 3192..3347 | CDD:238058 | 49/162 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 72 | 1.000 | Domainoid score | I9342 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1024 | 1.000 | Inparanoid score | I277 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D128982at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004257 | |
OrthoInspector | 1 | 1.000 | - | - | otm41823 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2997 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.830 |