Sequence 1: | XP_016866340.1 | Gene: | LAMA2 / 3908 | HGNCID: | 6482 | Length: | 3212 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 4110 | Identity: | 996/4110 - (24%) |
---|---|---|---|
Similarity: | 1524/4110 - (37%) | Gaps: | 1327/4110 - (32%) |
- Green bases have known domain annotations that are detailed below.
Human 25 LAAVAVRLAHELRARGLFPAVLNLASNALITTNATCGE--KGPEMYCKLV------EHVPGQPVR 81
Human 82 NPQCRICNQNSSNPNQRHPITNAIDGKNTWWQSPSIKNGIEYHYVTITLDLQQVFQIAYVIVKAA 146
Human 147 NSPRPGNWILERSLD-DVEYKPWQYHAVTDTECLTLYNIYPRTGPPSY---AKDDEVICTSFYSK 207
Human 208 IHPLENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREIDP 270
Human 271 IVTRRYYYSVKDISVGGMCICYGHARACPL-DPATNKS-----RCECEHNTCGDSCDQCCPGFHQ 329
Human 330 KPWRAGTFLTKTECEACNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCET 394
Human 395 CTDGFFRPKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCA 459
Human 460 RGYTGYPDCKACNCSGLGSKNEDPCFG----PCICKENVEGGDCSRCKSGFFNLQEDNWKGCDEC 520
Human 521 FCSGVSNRCQSSYWTYGKIQDMSGWYLTDLPGRIRVAPQQDDLDSPQQISISNAEARQALPHSYY 585
Human 586 WSAPAPYLGNKLPAVGGQLTFTISYDLEEEEEDTERVLQLMIILEGNDLSISTAQDEVYLHPSEE 650
Human 651 HTNVLLLKEESFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAIFRLSSVNLESAVSYPT 715
Human 716 DGSIAAAVEVCQCPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFG---HAESCDDVTGECLN 777
Human 778 CKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPS-------------NNFSP------- 822
Human 823 ----------TCHLDR--SLGLIC--DG---CPVGYTGPRCERCAEGYFGQPSVPGGSCQP---- 866
Human 867 --------------CQCND---------------NLDFSIPGSCD-----------------SLS 885
Human 886 GSCLICKPGTTGRYCELCADGYFG-DAVDAKNCQPCRCNAGGSFSEVCHSQTGQCECRANVQGQR 949
Human 950 CDK-------------------------------------------------------------C 953
Human 954 KPNMWR----------------------DP---------------EKRFCVLCDCDPVG------ 975
Human 976 -------------------------------------SVSPQCDITGRCVCK------------- 990
Human 991 -SGFV---------------------------------GKQCNL---------GRQVH------- 1005
Human 1006 -----------QQEEQPRRAQRVLGSP-------------------------------------- 1021
Human 1022 --------------QRWAIG--------------------------------------------- 1027
Human 1028 ----------------------------------------------------------------- 1027
Human 1028 -------SSSGCPRGAYRAPAPAGTFGL-------------QSA--------------------- 1051
Human 1052 ---------------------------------------RGCVPCNCNSFGSKSFDCEE-SGQCW 1076
Human 1077 CQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGNNCDPKTGRCICPPNTIGEKCSKCAPNTWGH 1141
Human 1142 SITTGCKACNCSTVG--SLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPGTD 1204
Human 1205 ATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYCFGTTTQCSEAK 1269
Human 1270 GLIRTW-----------------VTLKAEQTILPLVDEALQHTTTKGIVFQHPEIVAHMDLMRED 1317
Human 1318 LHLEPFYWKLPEQF--EGKKLMAYGGKLKYAIYFEAREETGFS---TYNPQVIIRGGTPTHARII 1377
Human 1378 VRHMAAPLIGQLTRHEIEMTEKEWKYYGDDPRVHRTVTREDFLDILYDIHYILIKATYGNFMRQS 1442
Human 1443 RISEISMEVAEQGRGTTMTPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTC 1507
Human 1508 VPCQCNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYG-IVKGLPNDCQQCACPLISSSNNFS 1571
Human 1572 PSC-VAEGLDDYRCTACPRGYEGQYCERCAPGYTGSP-------------GN------------- 1609
Human 1610 -------------------PG--------GSCQECECDPYG------------------------ 1623
Human 1624 ----------------------SLPVPCDPVTGFCTCRPGATGRKCDGC--KHW-HAREGWECVF 1663
Human 1664 C--------------------------GDECTG---------------------LLLGDLARLEQ 1681
Human 1682 MVMSI-----NLTGPLPAPYKMLYGLENMTQELK---HLLSP--------QRAPERLIQLAEGNL 1730
Human 1731 NTLVTEMNELLTRATKVTADGEQTGQDAERTNTRAKSLGEFIKELARDAEAVNEKAIKLNETLGT 1795
Human 1796 RDEAFERNLE-GLQKEIDQMIKELRRKNLETQKEIAEDELVAAEALLKKVKKLFGE-------SR 1852
Human 1853 GENEEMEKDLREKLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKKK-EAVESGKR 1916
Human 1917 QIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLP----------PMSEELNDKIDDLSQEI 1971
Human 1972 KDRKLAEKVSQAESHAAQLNDSSAVLDGILDEAKNISFNATAAFKAYSNIKDYIDEAEKVAKEAK 2036
Human 2037 DLAHEATKLATGPRGLLKEDAKGCLQKSFRILNEAKKLANDVKEN-EDHLNGLKTRIENADARNG 2100
Human 2101 ---DLLRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKL 2162
Human 2163 ADSVAKTNAVV----KDPSK-NKIIADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKE 2222
Human 2223 LINQARKQANSIKVSVSSGGDCIRTYK-PEIKK--GSYNNIVVNVKTAVADNLLFYLG-----SA 2279
Human 2280 KFIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYRIVASRTGRNGTISVRALDGPKAS 2344
Human 2345 IVPSTHHSTSPPGY-----TILDVDANAMLFVGGLTGKLKKADAVRVIT---FTGCMGETYFDNK 2401
Human 2402 PIGLWNFREKEGDCKGCTVSPQVEDSEGTI---QFDGEGYA-------LVSRPIRWYPNISTVMF 2456
Human 2457 KFRT--FSSSALLMYLATRDLRDFMSVELTDGHIKVSYDLGSGMASVVSNQN-HNDGKWKSFTLS 2518
Human 2519 RIQKQANISIVDIDTNQEENIATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEVNLKKYS 2583
Human 2584 GCLKDIEISRTPYNILSSPDYV---GVTKGCSLENVYTVSFP--KPGFVELSPVPIDVGTEINLS 2643
Human 2644 FSTKNESGIILLGSGGTPAPPRRKRRQTGQAYYAILLNRGRLEVHLSTGARTMRKIVIRPEPNLF 2708
Human 2709 HDGREHSVHVERTRGIFTVQVD--ENRRYMQNLTVEQP--IEVKKLFVGGAPPEFQP--SPLRNI 2767
Human 2768 PPFEGCIWNLVINSVPMDFARPVSFKNADIGRCAHQKL---------------REDEDGAAPAEI 2817
Human 2818 V--IQPE-----PVPTP--------------------AFPTPTP----------------VLTHG 2839
Human 2840 P-----------CAAESEPALLI-----GSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAE 2888
Human 2889 SGLLFYMARINHADFATVQLRNGLPYFSYDLGSGDTHTMIPT--KINDGQWHKIKIMRSKQEGIL 2951
Human 2952 YVD-----GASNRTISPKKADILDVVGMLYVGGL------PINYTTRRIGPVTYSIDGCVRNLHM 3005
Human 3006 AEAPADLEQPTSSFHVGTCFANAQRGTYFDG-TGFAKAVGGFKVGLDLLVEFEFRTTTTTGVLLG 3069
Human 3070 ISSQKMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGH--LCDGQWHKVTANKIKHRIELTVD 3132
Human 3133 GNQVEAQSPNPASTSADTNDPVFVGGFPDDLKQFGLTTSIPFRGCIRSLKLTKGTGKPLEVNFAK 3197
Human 3198 ALELRGVQPVSCPAN 3212 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LAMA2 | XP_016866340.1 | None | |||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 107/265 (40%) |
EGF_Lam | 272..>314 | CDD:238012 | 20/44 (45%) | ||
EGF_Lam | 332..389 | CDD:238012 | 32/56 (57%) | ||
EGF_Lam | 402..443 | CDD:238012 | 18/50 (36%) | ||
EGF_Lam | 448..491 | CDD:238012 | 13/43 (30%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 19/240 (8%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 23/54 (43%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 7/46 (15%) | ||
EGF_Lam | 631..673 | CDD:238012 | 14/41 (34%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 7/51 (14%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 16/50 (32%) | ||
EGF_Lam | 785..828 | CDD:238012 | 13/42 (31%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 7/136 (5%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 20/49 (41%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 20/37 (54%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 17/49 (35%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 21/56 (38%) | ||
LamB | 1632..1760 | CDD:214597 | 30/139 (22%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 16/25 (64%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 26/42 (62%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 24/48 (50%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 4/51 (8%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 4/45 (9%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 15/37 (41%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 4/33 (12%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 55/284 (19%) | ||
Tar | 2278..2662 | CDD:223910 | 87/412 (21%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 33/133 (25%) | ||
LamG | 2674..2843 | CDD:238058 | 53/176 (30%) | ||
LamG | 2878..3029 | CDD:238058 | 44/171 (26%) | ||
LamG | 3078..3205 | CDD:214598 | 35/148 (24%) | ||
LamG | 3349..3512 | CDD:238058 | 44/168 (26%) | ||
LamG | 3535..3689 | CDD:238058 | 42/155 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 87 | 1.000 | Domainoid score | I7981 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2298 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |