DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and AT5G08750

DIOPT Version :10

Sequence 1:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001078548.1 Gene:AT5G08750 / 830776 AraportID:AT5G08750 Length:370 Species:Arabidopsis thaliana


Alignment Length:129 Identity:23/129 - (17%)
Similarity:32/129 - (24%) Gaps:73/129 - (56%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QASQNSGD------ICRICHC-ESDPQN------------------------------------- 54
            :|.:.|.|      .||:|.| |||.:.                                     
plant    35 EAPRYSSDKDTGLPTCRVCQCAESDRRGDAALGFLGITPPVSEPRRSNAGEETVDQRSSVVKSSG 99

  Fly    55 --PLLTP---------------------------CYCSGSLKYVHQACLQQWLTASETNSCELC 89
              .|::|                           |.|...|..||.||..:|.....:..||:|
plant   100 FIELISPDGEVFVCANDDIEMGAWQHRDKLLELGCSCKNDLALVHYACALKWFVNHGSTVCEIC 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 20/115 (17%)
AT5G08750NP_001078548.1 RING_Ubox <130..164 CDD:473075 11/34 (32%)

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