DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and AT5G05830

DIOPT Version :10

Sequence 1:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_196202.1 Gene:AT5G05830 / 830468 AraportID:AT5G05830 Length:204 Species:Arabidopsis thaliana


Alignment Length:59 Identity:20/59 - (33%)
Similarity:25/59 - (42%) Gaps:6/59 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SQNSGDICRICHCESDPQN-----PLLTPCYCSGSLKYVHQACLQQWLTASETNSCELC 89
            ||:..| |||||...|..|     |:...|.|...|...|:.|.:.|........||:|
plant    73 SQSERD-CRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVC 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 17/53 (32%)
AT5G05830NP_196202.1 RINGv 78..131 CDD:128983 18/54 (33%)

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