DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and AT3G47550

DIOPT Version :10

Sequence 1:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_190339.1 Gene:AT3G47550 / 823909 AraportID:AT3G47550 Length:288 Species:Arabidopsis thaliana


Alignment Length:130 Identity:39/130 - (30%)
Similarity:54/130 - (41%) Gaps:35/130 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELCKFPFIMH----------- 96
            ||||. |.|....|..||.|:|||||.|:.|:|:|.......:||:|..|: .|           
plant    69 CRICQ-EEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY-QHGYTAPPPPPPD 131

  Fly    97 -TKIKPFNEW-----------RSLDISGIERRRL-----CYSVLFHCAAALC-----VIWSLCVL 139
             |.|...::|           |.|.::..||..|     .||......||.|     ::.:|.:|
plant   132 ETIIHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAAFCRSAALILMALLLL 196

  Fly   140  139
            plant   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 22/49 (45%)
AT3G47550NP_190339.1 RINGv 69..115 CDD:128983 21/46 (46%)
DUF3675 121..237 CDD:463576 15/76 (20%)

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