DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and marchf4

DIOPT Version :9

Sequence 1:NP_001246695.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001025336.1 Gene:marchf4 / 562065 ZFINID:ZDB-GENE-041210-304 Length:378 Species:Danio rerio


Alignment Length:373 Identity:80/373 - (21%)
Similarity:138/373 - (36%) Gaps:106/373 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNAKTSSDIEHVDWNSGQHYANVRFGSGSSQASQNSG---------------------------D 41
            ||..|.......||:.    |:....:|:..|:..||                           .
Zfish    46 DNNNTLRAHRLRDWSG----ASTEDSAGADAAAGGSGWTGAAAEEFSRDRKDDRFSFISYAEGTP 106

  Fly    42 ICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELC--KFPFIMHTKIKPFNE 104
            :||||. :...:..||:||.||||::..||.||.:|::...:.:||||  |:..|..:...|. :
Zfish   107 VCRICF-QGPEKGELLSPCRCSGSVRSTHQPCLIKWISERGSWTCELCYYKYQVIAISTKNPL-Q 169

  Fly   105 WRSLDISGIERRRLCYSVLFHCAAALCVIWSLCVLIERAADDVQRGLIDWPFWTKLA-------- 161
            |:::.::.||:.::..::|    .:|.:|.|                |.|..|:.|:        
Zfish   170 WQAISLTVIEKVQIAAAIL----GSLFLIAS----------------ISWLVWSSLSPSAKWQRQ 214

  Fly   162 ----VVTVGLTGGIVFMYIQCKAYL--------HLCHRWKARNRILLIQNAPEKIHPVAPPSPVA 214
                .:..|:.|   ||.:.|.|.:        .:.|||:|.|:...:.|..:|     ..|...
Zfish   215 DLLFQICYGMYG---FMDVVCIALIVHEGPSVFRIFHRWQAVNQQWKVLNYDKK-----RDSEQQ 271

  Fly   215 AHHQHFSEPLAHAGSTSG---AVEINASGAAGGYCAHEANCASMDNGG------GGAEMGLHQQM 270
            ...:..::.|......:|   :..:::..||......|....|.|:.|      |......|   
Zfish   272 KSSEEQTQTLVQQRENTGSNISPSLSSILAAAASPVLENTADSQDSTGEYMDADGTTLPDQH--- 333

  Fly   271 QRLLNASPHHMLQMAAELEVPHS----SSSACTQTEDGHGHQRHQQMQ 314
                  .|:::||:.:.|. ||.    |.:..|.|.......|...|:
Zfish   334 ------CPYNLLQLLSHLR-PHETRTLSGNVSTNTNSSSSKPREVVMR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_001246695.1 RINGv 42..90 CDD:128983 21/49 (43%)
marchf4NP_001025336.1 RINGv 107..153 CDD:128983 19/46 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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