DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and MARCHF1

DIOPT Version :10

Sequence 1:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001381888.1 Gene:MARCHF1 / 55016 HGNCID:26077 Length:545 Species:Homo sapiens


Alignment Length:166 Identity:88/166 - (53%)
Similarity:126/166 - (75%) Gaps:4/166 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELCKFPFIMHTKIKPFNEW 105
            ::|||||||.|.::||:|||.|:|:|::|||:||.||:.:|:|..|||||:.|||.||:||..:|
Human   334 EVCRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKW 398

  Fly   106 RSLDISGIERRRLCYSVLFHCAAALCVIWSLCVLIERAADDVQR----GLIDWPFWTKLAVVTVG 166
            ..|.::..|||::..||.||..|..||:|||.|||:|.|:::::    |:::|||||||.||.:|
Human   399 EKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIG 463

  Fly   167 LTGGIVFMYIQCKAYLHLCHRWKARNRILLIQNAPE 202
            .|||:||||:|||.|:.|..|.||.||::.:||.|:
Human   464 FTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPD 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 30/50 (60%)
MARCHF1NP_001381888.1 RING_Ubox 334..399 CDD:473075 37/64 (58%)

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