DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and MARCHF2

DIOPT Version :9

Sequence 1:NP_001246695.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001005415.1 Gene:MARCHF2 / 51257 HGNCID:28038 Length:246 Species:Homo sapiens


Alignment Length:190 Identity:61/190 - (32%)
Similarity:90/190 - (47%) Gaps:26/190 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSGDICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELCKFPFIMHTKIKPF 102
            :.|..||||| |......||:||.|:|:|..||::||::||::|.|:.||||...|.:..:.:|.
Human    59 SDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPRPL 122

  Fly   103 NEWRSLDISGIERRRLCYSV---LFHCAAALCVIWSLCVLIERAADDVQR--------GLIDWPF 156
            .||........|:|.||..:   ||....|....| ||:   |.|.|..|        |||.   
Human   123 TEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGW-LCL---RGAQDHLRLHSQLEAVGLIA--- 180

  Fly   157 WTKLAVVTVGLTGGIVFMYIQCKAYLHLCHRWKARNRILLIQNAPEKIHPVAPP-SPVAA 215
             ..:|:.|:.:...:|.....|:.|    ..|:..|:.:.:: ..|...|..|. ||:||
Human   181 -LTIALFTIYVLWTLVSFRYHCQLY----SEWRKTNQKVRLK-IREADSPEGPQHSPLAA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_001246695.1 RINGv 42..90 CDD:128983 24/47 (51%)
MARCHF2NP_001005415.1 RING_CH-C4HC3_MARCH2 62..113 CDD:319722 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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