DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and Marchf4

DIOPT Version :10

Sequence 1:NP_648305.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001038998.1 Gene:Marchf4 / 381270 MGIID:2683550 Length:409 Species:Mus musculus


Alignment Length:244 Identity:58/244 - (23%)
Similarity:93/244 - (38%) Gaps:69/244 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FGSGSSQASQNSGDICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELCKFP 92
            :..|||..|.....:||||. :...|..||:||.|.||:|..||.||.:|::.....|||||.:.
Mouse   147 YSLGSSLDSGMRTPLCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK 210

  Fly    93 F-IMHTKIKPFNEWRSLDISGIERRRLCYSV---LFHCAAALCVIWSLCVLIERAADDVQRGLID 153
            : ::....|...:|:::.::.||:.::..::   ||..|:...:|||   ....:|        .
Mouse   211 YHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWS---TFSPSA--------K 264

  Fly   154 WPFWTKLAVVTVGLTGGIVFMYIQC--------KAYLHLCHRWKARNRILLIQN----------- 199
            |.....|..:..|:.|   ||.:.|        .:...:..||:|.|:...:.|           
Mouse   265 WQRQDLLFQICYGMYG---FMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQK 326

  Fly   200 --------------------APEKIHPVA-----------PPSPVAAHH 217
                                ..|...|.|           |..||:.||
Mouse   327 SGGRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHH 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_648305.1 RING_CH-C4HC3_MARCH1-like 42..93 CDD:438359 23/50 (46%)
Marchf4NP_001038998.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..133
RING_CH-C4HC3_MARCH4 156..211 CDD:438473 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..372 5/48 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..409
Blue background indicates that the domain is not in the aligned region.

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