DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and CG2991

DIOPT Version :9

Sequence 1:NP_001246695.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster


Alignment Length:184 Identity:47/184 - (25%)
Similarity:79/184 - (42%) Gaps:51/184 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETN-----SCELCKFPFIMHTKIKPF 102
            |.||: :||...||:.||.|:|.:..||..||::||..|.:|     ||::|..|:.:....|  
  Fly   392 CWICY-DSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHPYEIEKSKK-- 453

  Fly   103 NEW-RSLDISGIERRRLCYSVLFHCAAALCVIWSLC-------VLIERAADDVQRGLIDWPFWTK 159
            .|| :...|.             |.:..:.:|..:|       |:|:...|.:.|          
  Fly   454 LEWDKGFTIQ-------------HWSKTVILITLMCVTGATAWVVIQMYVDPLVR---------- 495

  Fly   160 LAVVTVGLTGGIVFMYIQC------KAYLHLCHRWKARNRILLIQNAPEKIHPV 207
              |:|||:...|.::.::|      .||    .|.|..:..::..:..||:|.:
  Fly   496 --VMTVGIAVLIGYVCVKCLGENTVVAY----QRAKVSSINIVTSSEMEKLHTI 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_001246695.1 RINGv 42..90 CDD:128983 21/51 (41%)
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 33/117 (28%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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