Protein Alignment CG4080 and Marchf2

DIOPT Version :9

• Sequence 1: NP_001246695.1
• Gene: CG4080 / 39079
• FlyBaseID: FBgn0035983
• Length: 617
• Species: Drosophila melanogaster
• Sequence 2: NP_663461.2
• Gene: Marchf2 / 224703
• MGIID: 1925915
• Length: 287
• Species: Mus musculus
• Alignment Length: 272
• Identity: 78/272 - (28%)
• Similarity: 114/272 - (41%)
• Gaps: 61/272 - (22%)

  Fly     3 CDNAKT---SSDIEHVDWNSGQHYANVRFGSG-------SSQASQNSGDICRICHCESDPQNPLL 57
            ||.:.:   |..:|.......|:.|.|....|       .:..||:....|||||..::.:| ||
Mouse    14 CDCSSSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDSQSDCPFCRICHEGANGEN-LL 77

  Fly    58 TPCYCSGSLKYVHQACLQQWLTASETNSCELCKFPFIMHTKIKPFNEWRSLDISGIERRRLCYS- 121
            :||.|:|:|..||::||::||::|.|:.||||...|.:..:.:|..||........|:|.||..
Mouse    78 SPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDM 142

  Fly   122 VLFHCAAALCVI--WSLCVLIERAADDVQR--------GLIDWPFWTKLAVVTVGLTGGIVFMYI 176
            |.|.....|..|  | ||:   |.|.|..|        |||.    ..:|:.|:.:...:|....
Mouse   143 VCFVFITPLAAISGW-LCL---RGAQDHLRLHSRLEAVGLIA----LTIALFTIYVLWTLVSFRY 199

  Fly   177 QCKAYLHLCHRWKARNR--ILLIQNAPEKIHPVAPPSPVAAHH-----------QHFSEPLA--- 225
            .|:.|    ..|:..|:  .|.|:.|.....|         ||           |.|| ||:
Mouse   200 HCQLY----SEWRKTNQKVRLKIREADGSEDP---------HHSLLATGLLKKLQRFS-PLSLRQ 250

  Fly   226 -HAGSTSGAVEI 236
             |.....|.|::
Mouse   251 EHGSIQGGMVQV 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4080	NP_001246695.1	RINGv	42..90	CDD:128983	24/47 (51%)
Marchf2	NP_663461.2	RINGv	63..110	CDD:128983	24/47 (51%)
		Vpu	173..>224	CDD:109608	13/58 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5183
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810