DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and marchf11

DIOPT Version :9

Sequence 1:NP_001246695.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_002933170.1 Gene:marchf11 / 100487933 XenbaseID:XB-GENE-982895 Length:287 Species:Xenopus tropicalis


Alignment Length:189 Identity:46/189 - (24%)
Similarity:81/189 - (42%) Gaps:40/189 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YANVRFGSGSSQASQN-SGDICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSC 86
            :...|..|.|.|::.. |...|:||. :...|..||.||.|.||::|.||.||.:|::...:.:|
 Frog    33 HGGTRTDSDSVQSNDTPSPPTCKICF-QGPEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTC 96

  Fly    87 ELCKFPF-IMHTKIKPFNEWRSLDISGIERRRLCYSVLFHCAAALCVIWSLCVLIERAADDVQRG 150
            |||.:.: ::..::|...:|:.:.::.:|:.::...:|........|.|.|              
 Frog    97 ELCCYRYQVIAIRMKRPCQWQCITVTLVEKVQMIAVILGSLFLISSVTWLL-------------- 147

  Fly   151 LIDWPFWTKLAV---------VTVGLTGGIVFMYIQC--------KAYLHLCHRWKARN 192
               |..::..||         :..|:.|   ||.:.|        .|...:..||:|.|
 Frog   148 ---WSAFSPQAVWQRKDILFQICYGMYG---FMDLVCIGLIVHEGAAVYTVFKRWRAVN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_001246695.1 RINGv 42..90 CDD:128983 20/47 (43%)
marchf11XP_002933170.1 RING_Ubox 54..103 CDD:388418 21/49 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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