DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4080 and march9

DIOPT Version :9

Sequence 1:NP_001246695.1 Gene:CG4080 / 39079 FlyBaseID:FBgn0035983 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_001339845.1 Gene:march9 / 100003493 ZFINID:ZDB-GENE-081031-71 Length:342 Species:Danio rerio


Alignment Length:285 Identity:65/285 - (22%)
Similarity:112/285 - (39%) Gaps:81/285 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCELCKFPF-IMHTKIKPFNEWR 106
            ||||. :...|..||:||.|.||::..||.||.:|::...:.|||||.|.: ::....|...:|:
Zfish   106 CRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQWQ 169

  Fly   107 SLDISGIERRRLCYSVLFHCAAALCVIWSLCVLIERAADDVQRGLIDWPFWTKLA---------- 161
            ::.::.||:.::          |..::.||.::..          |.|..|:.|:          
Zfish   170 AISLTVIEKVQI----------AAIILGSLFLIAS----------ISWLVWSSLSPSAKWQRQDL 214

  Fly   162 --VVTVGLTGGIVFMYIQC--------KAYLHLCHRWKARNRILLIQNAPEKIHPVAPPSPVAAH 216
              .:..|:.|   ||.|.|        .:...:..||:|.|:...:.|. ||...:..|      
Zfish   215 LFQICYGMYG---FMDIVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNY-EKSKDLGDP------ 269

  Fly   217 HQHFSEPLAHAGSTSGAVEINASGAAGGYCAHEANCASMDNGGGGAEMGLHQQMQRLLNASPHH- 280
                               :::|..|||. ...:|...:.:|..||     |:::||.....|| 
Zfish   270 -------------------LSSSSKAGGR-GSRSNPHGLASGSRGA-----QRVRRLRTILNHHC 309

  Fly   281 ---MLQMAAELEVPHSSSSACTQTE 302
               :|.:.::|..........|..|
Zfish   310 GYTILHILSQLRPSDPRLGTATNRE 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4080NP_001246695.1 RINGv 42..90 CDD:128983 21/46 (46%)
march9XP_001339845.1 RINGv 105..151 CDD:128983 20/45 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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