DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp27 and hsp-43

DIOPT Version :10

Sequence 1:NP_524000.1 Gene:Hsp27 / 39078 FlyBaseID:FBgn0001226 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001123107.2 Gene:hsp-43 / 180895 WormBaseID:WBGene00002024 Length:393 Species:Caenorhabditis elegans


Alignment Length:115 Identity:40/115 - (34%)
Similarity:65/115 - (56%) Gaps:5/115 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 FQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPNEVVSTVSS 154
            |.|.||..||:|.|:.||.:|:|:::||:||:..|.....:.:|||||.||:..|.|.:.|::.:
 Worm   114 FAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLPRDVDFNSIQSSIDA 178

  Fly   155 DGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGDGKAENG 204
            .|.|.::|....:......||::.|:  |..|.|   |..|.|..:::.|
 Worm   179 KGRLQVEAGKFNNMALQGRERMIPIE--GAGHHS---PRFENGTLRSQRG 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp27NP_524000.1 metazoan_ACD 86..163 CDD:107247 29/72 (40%)
hsp-43NP_001123107.2 metazoan_ACD 107..186 CDD:107247 29/71 (41%)

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