DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp27 and hsp30d

DIOPT Version :10

Sequence 1:NP_524000.1 Gene:Hsp27 / 39078 FlyBaseID:FBgn0001226 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_002937646.1 Gene:hsp30d / 100489362 XenbaseID:XB-GENE-5917036 Length:215 Species:Xenopus tropicalis


Alignment Length:141 Identity:49/141 - (34%)
Similarity:72/141 - (51%) Gaps:29/141 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PAVGKDG---FQVCMDVSQFKPNELTVKVVDNTVVVEGKHEER---EDGHGMIQ-RHFVRKYTLP 140
            |:.||||   |::.:||..|.|:|||||:....|:|.||.|.:   |||....: |.:.|:..||
 Frog    86 PSSGKDGKDHFELTLDVRDFSPHELTVKMQGRRVIVTGKQERKSDSEDGSYFHEYREWKREAELP 150

  Fly   141 KGFDPNEVVSTVSSDGVLTLKAPP---PPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAG----- 197
            :|.:|.:||.:.|.||.|.::||.   ||:.|:             |..:|:. |||...     
 Frog   151 EGVNPEQVVCSFSKDGHLHIQAPRLALPPAPER-------------PIPISMD-PAPRDAQEIPP 201

  Fly   198 DGKAENGSGEK 208
            |.:..|..||:
 Frog   202 DAQNSNADGEQ 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp27NP_524000.1 metazoan_ACD 86..163 CDD:107247 34/83 (41%)
hsp30dXP_002937646.1 ACD_HspB9_like 88..174 CDD:107236 35/85 (41%)

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