DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp23 and hsp30e

DIOPT Version :9

Sequence 1:NP_001246694.1 Gene:Hsp23 / 39077 FlyBaseID:FBgn0001224 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_002944275.2 Gene:hsp30e / 100493795 XenbaseID:XB-GENE-5755528 Length:215 Species:Xenopus tropicalis


Alignment Length:190 Identity:57/190 - (30%)
Similarity:89/190 - (46%) Gaps:33/190 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSLADDLGRMSMVPFYEPYYCQRQRNPYLALVGPMEQQLRQLEKQ-----VGASSGSSGAVSKI 66
            :||:.:|:.|...        |..:....|:    .:..:|::..|     ...:.|:|.:..|.
 Frog    39 ILSMRNDMERRMQ--------CVNEAYRLLS----QDMDMRRITDQSRQPRATETEGTSPSSGKD 91

  Fly    67 GKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEERED--DHGFI--TRHFVRRYALPPGYEAD 127
            |||.|::.:||..|.|.||.||.|...|:|.|.||.:.|  |..::  .|.:.|...||.|...:
 Frog    92 GKDHFELTLDVRDFSPHELTVKTQGRRVIVTGKHERKSDSEDGSYVHEYREWKREAELPEGVNPE 156

  Fly   128 KVASTLSSDGVLTIKVPK---PPAIEDKGNERIVQIQQVGPAHLNVKENPKEAVEQDNGN 184
            :|..:||.||.|.|:.|:   |||     :||.:.| .:.||..:.:|.|.:|   .|.|
 Frog   157 QVVCSLSKDGHLHIQAPRLALPPA-----SERPIPI-SMDPAPRDAQEIPPDA---QNSN 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp23NP_001246694.1 metazoan_ACD 67..145 CDD:107247 32/81 (40%)
IbpA <69..161 CDD:223149 36/98 (37%)
hsp30eXP_002944275.2 ACD_HspB9_like 88..174 CDD:107236 33/85 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1187096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.