DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp23 and LOC100489207

DIOPT Version :9

Sequence 1:NP_001246694.1 Gene:Hsp23 / 39077 FlyBaseID:FBgn0001224 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_012822866.2 Gene:LOC100489207 / 100489207 -ID:- Length:206 Species:Xenopus tropicalis


Alignment Length:102 Identity:41/102 - (40%)
Similarity:56/102 - (54%) Gaps:7/102 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEERED--DHGFI--TRHFVR 116
            :.|:|.:..|.|||.|::.:||..|.|.|:.||.|...|:|.|.||.:.|  |..::  .|.:.|
 Frog    75 TEGTSPSSDKDGKDHFELMLDVGDFSPHEITVKTQGRRVIVTGKHERKSDSEDGSYVHEYREWNR 139

  Fly   117 RYALPPGYEADKVASTLSSDGVLTIKVP---KPPAIE 150
            |..||.|...::|..:||.||.|.||.|   .|||.|
 Frog   140 RAELPEGVNLEQVVCSLSKDGHLHIKAPWLALPPAPE 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp23NP_001246694.1 metazoan_ACD 67..145 CDD:107247 34/84 (40%)
IbpA <69..161 CDD:223149 36/89 (40%)
LOC100489207XP_012822866.2 ACD_HspB9_like 82..167 CDD:107236 34/84 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1187096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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