DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp26 and cited1

DIOPT Version :9

Sequence 1:NP_001287000.1 Gene:Hsp26 / 39075 FlyBaseID:FBgn0001225 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_031746522.1 Gene:cited1 / 101734146 XenbaseID:XB-GENE-494499 Length:142 Species:Xenopus tropicalis


Alignment Length:24 Identity:12/24 - (50%)
Similarity:14/24 - (58%) Gaps:3/24 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STLLSL--VDELQEPRSPIYELGL 25
            |.||.|  ||| :...|.:.||||
 Frog    92 SNLLELDRVDE-EVLMSLVLELGL 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp26NP_001287000.1 metazoan_ACD 85..163 CDD:107247
IbpA <87..179 CDD:223149
cited1XP_031746522.1 CITED <51..132 CDD:398273 12/24 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165168179
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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