DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4461 and AT1G52560

DIOPT Version :9

Sequence 1:NP_648304.1 Gene:CG4461 / 39074 FlyBaseID:FBgn0035982 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_175665.1 Gene:AT1G52560 / 841687 AraportID:AT1G52560 Length:232 Species:Arabidopsis thaliana


Alignment Length:159 Identity:31/159 - (19%)
Similarity:61/159 - (38%) Gaps:39/159 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LW---DDSRLWWPSPHTSRSDLLRPLDELVSRRVRNQLIQSTPYEWAHPMR--WDNYYSGE---- 89
            ||   ||...:.|:           |:|.....:.|.|||:|     ..|.  :||:....    
plant    78 LWRNTDDHGYFTPT-----------LNEFFPPTIGNTLIQAT-----ENMNRIFDNFNVNPFQLM 126

  Fly    90 -RVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHNRRDEGSNGLVERHFVRKYLLPRGYN 153
             :|...:..:::..:|......|:.:..||..:.::|:|...:|..:...:.::..|   ..||.
plant   127 GQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSK---SYGYY 188

  Fly   154 ANEV-------ISDISSD---GILTIKAP 172
            ...:       :.||.::   |:|.:..|
plant   189 NTSLSLPDDAKVEDIKAELKNGVLNLVIP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4461NP_648304.1 metazoan_ACD 94..169 CDD:107247 14/84 (17%)
AT1G52560NP_175665.1 ACD_sHsps-like 129..218 CDD:107221 16/92 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 51 1.000 Domainoid score I4315
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I2586
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1187096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.060

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