DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4461 and l(2)efl

DIOPT Version :10

Sequence 1:NP_648304.1 Gene:CG4461 / 39074 FlyBaseID:FBgn0035982 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster


Alignment Length:202 Identity:71/202 - (35%)
Similarity:95/202 - (47%) Gaps:40/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLVPTTYRDLSREFD---RLRPLYHPPYDFQLYPYLWDD--SRLWWPSPHTSRSDLLRPLDELV 60
            ||:||..:||...|.|   |...|....:...|..   ||  |.:|...|...||..|||     
  Fly     1 MSVVPLMFRDWWDELDFPMRTSRLLDQHFGQGLKR---DDLMSSVWNSRPTVLRSGYLRP----- 57

  Fly    61 SRRVRNQLIQSTPYEWAHPMRWDNYYSGERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQG 125
                           | |........||..:::|.:.|.:.:||:||.|.:|.||..|.:|||:|
  Fly    58 ---------------W-HTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106

  Fly   126 NHNRRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIKAP----PPPPAKYYTPGERL 186
            .|..:.: .:|.|.|.|.|:|.||...|.:.|.|.:||||:||||||    |||..      |||
  Fly   107 KHEEKQD-EHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQT------ERL 164

  Fly   187 VRVHETG 193
            |::.:||
  Fly   165 VQITQTG 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4461NP_648304.1 metazoan_ACD 94..169 CDD:107247 32/74 (43%)
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 36/82 (44%)

Return to query results.
Submit another query.