DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fdx1 and Fdx1

DIOPT Version :10

Sequence 1:NP_523993.1 Gene:Fdx1 / 39070 FlyBaseID:FBgn0011769 Length:172 Species:Drosophila melanogaster
Sequence 2:NP_058822.2 Gene:Fdx1 / 29189 RGDID:62036 Length:188 Species:Rattus norvegicus


Alignment Length:153 Identity:51/153 - (33%)
Similarity:89/153 - (58%) Gaps:11/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CK--LISKQIAKPAF--YTPHNALHTTI---PRRHGEFEWQDPKSTDEIVNITYVDKDGKRTKVQ 72
            |:  |:....|.||.  :||  :.||..   |.|......:...|:::.|.:.:.::||:....:
  Rat    24 CRRLLVCGTRAGPAIPQWTP--SPHTLAEAGPGRPLSVSARARSSSEDKVTVHFKNRDGETLTTK 86

  Fly    73 GKVGDNVLYLAHRHGIEME--GACEASLACTTCHVYVQHDYLQKLKEAEEQEDDLLDMAPFLREN 135
            |||||::|.:...:.::::  ||||.:|||:|||:..:....:||....::|:|:||:|..|...
  Rat    87 GKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAFGLTNR 151

  Fly   136 SRLGCQILLDKSMEGMELELPKA 158
            ||||||:.|.|:|:.|.:.:|:|
  Rat   152 SRLGCQVCLTKAMDNMTVRVPEA 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fdx1NP_523993.1 PLN02593 57..172 CDD:178203 39/104 (38%)
Fdx1NP_058822.2 fer2 71..174 CDD:444718 38/99 (38%)

Return to query results.
Submit another query.