DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fdx1 and cox-15

DIOPT Version :9

Sequence 1:NP_001189075.1 Gene:Fdx1 / 39070 FlyBaseID:FBgn0011769 Length:172 Species:Drosophila melanogaster
Sequence 2:NP_496402.1 Gene:cox-15 / 174712 WormBaseID:WBGene00011526 Length:395 Species:Caenorhabditis elegans


Alignment Length:92 Identity:21/92 - (22%)
Similarity:38/92 - (41%) Gaps:15/92 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AFYTPHNALHTTIPRRHGEFEWQDPKSTDEIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIEM 90
            |:.|..:.|.|.:..|....    ||.|...:|:|.       ..|.|:....|..|.:...:.:
 Worm   315 AYLTVISVLSTFLIGRRAPI----PKRTRMALNLTV-------AAVFGQAALGVFTLINYVPVWL 368

  Fly    91 EGAC--EASLACTTCHVYVQHDYLQKL 115
             .||  ..|:|..:..:::.|: |::|
 Worm   369 -AACHQSGSMALLSSVLWLSHE-LRRL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fdx1NP_001189075.1 PLN02593 57..172 CDD:178203 13/61 (21%)
cox-15NP_496402.1 COX15-CtaA 52..384 CDD:280746 18/80 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R421
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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