DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4452 and Fam76b

DIOPT Version :10

Sequence 1:NP_648303.1 Gene:CG4452 / 39069 FlyBaseID:FBgn0035981 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_006242588.1 Gene:Fam76b / 367021 RGDID:1311077 Length:349 Species:Rattus norvegicus


Alignment Length:327 Identity:124/327 - (37%)
Similarity:180/327 - (55%) Gaps:54/327 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKVLFACSKCFSRHLYEELSSGQQLCKGCRGSTSVGKCTYCRSEFQPATKSQSACKKCEHYLG 65
            |:...|:||:||..|:.:||||.||||||.||.:..:.||||||||||..:|:.:.||||...:.
  Rat     1 MAASALYACTKCTQRYPFEELSQGQQLCKECRIAHPIVKCTYCRSEFQQESKTNTICKKCAQNVK 65

  Fly    66 KYGKPSACECCKIVAAFGGSKCMRCASYEAKYGPPVQCDECKLRSAFDRRDE-NKKVNGKLLCWL 129
            ::|.|..|:.|.|:|||.|:||.||.:.|.|||.|..|::||.:.||||::| .:||:|||||||
  Rat    66 QFGTPKPCQYCNIIAAFIGTKCQRCTNSEKKYGAPQTCEQCKQQCAFDRKEEGRRKVDGKLLCWL 130

  Fly   130 CACAYKRALLKAQQEGRIPMSKKRPHEKTSSS--------------------HRDSAAAKKPS-- 172
            |..:|||.|.|.:::.:   |....|..:|||                    ||.|:...|.|  
  Rat   131 CTLSYKRVLQKTKEQRK---SLGSSHSNSSSSSLTEKDQHHSKHHHHHHHHHHRHSSGHHKVSSL 192

  Fly   173 --RNELG------KSGSGANNSGVNAVSGAGLDLPDKISR-----GNGGNGTIAAPAAITVDTNS 224
              ..|.|      ||.:...|           :.|.|..:     .||.:.:|...|    |:..
  Rat   193 SPEQEQGLWKQSHKSSAAIQN-----------ETPKKKPKLESKPSNGDSSSINQSA----DSGG 242

  Fly   225 SDHVVAITYLKERIASLEKRLNQKDKELLEKDKQLTELKGKNFEKENDMRNRLKEVERLHDMKVD 289
            :|:.|.|:.|||.:.||::.|.|:|:.:|||||:|||||.....:|:::|.::..:|:.|...|:
  Rat   243 TDNFVLISQLKEEVMSLKRLLQQRDQTILEKDKKLTELKADFQYQESNLRAKMNSMEKAHKETVE 307

  Fly   290 NL 291
            .|
  Rat   308 QL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4452NP_648303.1 FAM76 6..310 CDD:464993 123/322 (38%)
Fam76bXP_006242588.1 FAM76 6..311 CDD:464993 123/322 (38%)

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