DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp67A and Kif3c

DIOPT Version :10

Sequence 1:NP_523992.2 Gene:Klp67A / 39068 FlyBaseID:FBgn0004379 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_445938.1 Gene:Kif3c / 85248 RGDID:621538 Length:796 Species:Rattus norvegicus


Alignment Length:780 Identity:223/780 - (28%)
Similarity:354/780 - (45%) Gaps:163/780 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKVAVRVRPYNVRELEQKQRSIIKVMDRSALLFDPDEEDDEFFFQGAKQPYRDITKRMNKKLTME 73
            :||..|.||.:.:|.......|:.:          |.:..:...:..:....::.|      |..
  Rat    11 LKVVARCRPLSRKEEAAGHEQILTM----------DVKLGQVTLRNPRAAPGELPK------TFT 59

  Fly    74 FDRVFDIDNSNQDLFEECTAPLVDAVLNGYNCSVFVYGATGAGKTFTMLGSEAHP---GLTYLTM 135
            ||.|:|..:...||::|...||:|:||.|:|.:||.||.||.|||:||.|:...|   |:.....
  Rat    60 FDAVYDASSKQADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAF 124

  Fly   136 QDLFDKIQAQSDVRKFDVGVSYLEVYNEHVMNLLTKSGP---LKLRED-NNGVVVSGLCLTPIYS 196
            :.:|..| ::|..:::.|..||||:|.|.:.:||:|. |   |:|:|: ..||.:..|......:
  Rat   125 EHIFTHI-SRSQNQQYLVRASYLEIYQEEIRDLLSKE-PGKRLELKENPETGVYIKDLSSFVTKN 187

  Fly   197 AEELLRMLMLGNSHRTQHPTDANAESSRSHAIFQVHIRITERKTDTK---RTVKLSMIDLAGSER 258
            .:|:..::.|||..|....|..|..||||||||.:.:..:||.:|.:   |..||:::|||||||
  Rat   188 VKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSER 252

  Fly   259 -------------AASTKG-------------IGVRFKEGASINKSLLALGNCINKLADGLK-HI 296
                         ..||.|             .|.|.||.:.||.||.||||.|..||.... ||
  Rat   253 QNKAGPNTPGGPATQSTAGGGGGGGGTSGSGSSGERPKEASKINLSLSALGNVIAALAGNRSTHI 317

  Fly   297 PYRDSNLTRILKDSLGGNCRTLMVANVSMSSLTYEDTYNTLKYASRAKKIRTTLKQNVLKSKMPT 361
            |||||.|||:|:||||||.:|:|||.:..:|.:|:::.:||::|:|||.|:...:.|    :.|.
  Rat   318 PYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVN----EDPK 378

  Fly   362 EFYVKKIDEVVAENERLKERNKALEAKATQLERAGNSGFDPLELKTWYSKIDAVYAAARQLQEHV 426
            :..:::..|.:|   |||          .|||:.|..|..|....:...|  ||.|.|...:..|
  Rat   379 DTLLREFQEEIA---RLK----------AQLEKKGMLGKRPRRKSSRRKK--AVSAPAGYPEGAV 428

  Fly   427 L--------------------GMRSKI-KNI-NYRQTLKKELEEFRKLMCVDQRVCQEDFRRFAN 469
            :                    .:.:.: ||: ||.|..|:.|||       ::...|:|      
  Rat   429 IEAWVAEEEDDNNNNHRPPQPTLEAALEKNMENYLQEQKERLEE-------EKAAIQDD------ 480

  Fly   470 YMSTLTSQMEKYKEELPSWLSKMEIAYQDLESLKREVNKSKAYQILIVYVKYKDLE--LQLTKQN 532
             .|.::.:.:|..||    ..||      ||.||||   .:|.::|.  .|||.:|  |.:..:|
  Rat   481 -RSLVSEEKQKLLEE----KEKM------LEDLKRE---QQATELLA--AKYKAMESKLLIGGRN 529

  Fly   533 IFNNHVNAINQELVENLDLMRKSFRTACEVLNQTYDRLEDGQKL------TPEIEAVFERLLRKM 591
            |. :|.|    |..:.|:|.|:      |:..|.....|..|::      |.|:...:..|    
  Rat   530 IM-DHTN----EQQKMLELKRQ------EIAEQKRREREMQQEMLLRDEETMELRGTYSSL---- 579

  Fly   592 RFADSEANTKMAEMNPLAVPV-ALRSSAQEEEEPTCSLTASAKKRQRQAAQSDDDLHLSMEDFDS 655
               ..|...|..::..|...: |:::..|::.|....:....::.|.:..:.....:|.:|:|..
  Rat   580 ---QQEVEVKTKKLKKLYAKLQAVKAEIQDQHEEYIRVRQDLEEAQNEQTRELKLKYLIIENFIP 641

  Fly   656 QDTES--------DSEELHRTFKR--PRNLNETQVLGPCSSSSSSSTSSSSSARKALTATVTKPR 710
            .:.::        |.||....|:.  |..:|.:|:....:|:.......|..||.|: |..:.||
  Rat   642 PEEKNKIMNRLFLDCEEEQWKFQPLVPAGVNNSQMKKRPTSAVGYKRPISQYARVAM-AMGSHPR 705

  Fly   711  710
              Rat   706  705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp67ANP_523992.2 KISc_KIP3_like 8..346 CDD:276821 133/373 (36%)
Kif3cNP_445938.1 KISc_KIF3 9..367 CDD:276822 133/373 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 251..292 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..421 8/25 (32%)
Smc <452..>637 CDD:440809 53/231 (23%)
Globular. /evidence=ECO:0000255 633..793 18/74 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..796
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.