DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdxk and SOS4

DIOPT Version :9

Sequence 1:NP_996031.1 Gene:Pdxk / 39066 FlyBaseID:FBgn0085484 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_198601.2 Gene:SOS4 / 833763 AraportID:AT5G37850 Length:343 Species:Arabidopsis thaliana


Alignment Length:306 Identity:150/306 - (49%)
Similarity:198/306 - (64%) Gaps:15/306 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATNADIKRVLSIQSHVVHGYVGNKVATYPLQLLGFDVDPLNSVQFSNHTGYKTFKGPVSNEKELA 68
            |..:|..||||||||.|.||||||.|.:||||||:||||:|||||||||||.||||.|.|.::|.
plant    44 ALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGQQLC 108

  Fly    69 TIFEGLEENELLPLYSHLLTGYIGNPLFLRQVGHILKKLRQANPGLVYVCDPVMGDNGQLYVPKE 133
            .:.||||.|:|| .|:|:||||||:..||..:..::.|||..||.|.|||||||||.|:||||:|
plant   109 DLIEGLEANDLL-FYTHVLTGYIGSVSFLDTILEVINKLRSVNPNLTYVCDPVMGDEGKLYVPEE 172

  Fly   134 LLPVYRDEIIPLADIITPNQFEVELLTEKEVRSEAAVWEAMEWFHQRGIKTVVISSSDLGQPGVL 198
            |:.|||::::|||.::||||||.|.||...:.||....||....|..|...|||:|..:|  |:|
plant   173 LVHVYREKVVPLASMLTPNQFEAEKLTGLRINSEEDGREACAILHAAGPSKVVITSITIG--GIL 235

  Fly   199 RAFLSQQNGPRLAIDIPKQGGKDLV------FTGTGDLFASLFLAHSHGSKD-IANVFEKTIASL 256
            ....|.|....|.   |:| .|.|:      |||||||..:|.|..|:...| :....|..:::|
plant   236 LLIGSHQKEKGLK---PEQ-FKILIHKIPAYFTGTGDLMTALLLGWSNKYPDNLDKAAELAVSTL 296

  Fly   257 QAVIKRTVASLPNGGNGPVKAAERELKLVQSKTEIEQPQVLLKAQR 302
            ||:::||:......|..|. ::..|::|:||:.:|..|:|.|||:|
plant   297 QALLRRTLDDYKRAGYDPT-SSSLEIRLIQSQEDIRNPKVELKAER 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdxkNP_996031.1 ribokinase_pfkB_like 11..303 CDD:294126 148/299 (49%)
SOS4NP_198601.2 PLN02978 36..343 CDD:215529 150/306 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 114 1.000 Domainoid score I2015
eggNOG 1 0.900 - - E1_COG2240
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2731
Inparanoid 1 1.050 262 1.000 Inparanoid score I967
OMA 1 1.010 - - QHG53875
OrthoDB 1 1.010 - - D1091630at2759
OrthoFinder 1 1.000 - - FOG0002400
OrthoInspector 1 1.000 - - oto4034
orthoMCL 1 0.900 - - OOG6_102185
Panther 1 1.100 - - LDO PTHR10534
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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